RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA270367" and tax_kingdom = "Thermotogati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 5 ✖

bioproject 1

  • PRJNA270367 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4197292 4197292 PRJNA270367_P_NODE_45784_length_163_cov_0.912281_g45579_i0 PRJNA270367 45784 163 0.912281 1.48701803 Thermus sp. NEB1569 2918899 Bacteria Bacteria 296 5.68e-76   NTclustered gi|2199052145|gb|CP092445.1| 2918899 g45579 i0 99.387 6 163 1 100 0 1 163 659111 659273 Thermus sp. NEB1569 chromosome, complete genome blastn 978 296 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp. NEB1569
14399174 14399174 PRJNA270367_P_NODE_43392_length_165_cov_0.896552_g43187_i0 PRJNA270367 43392 165 0.896552 1.4793108 Thermus brockianus 56956 Bacteria Bacteria 228 2.139999999999999e-55   NTclustered gi|1102955210|gb|CP016312.1| 56956 g43187 i0 91.515 36.2666666666667 165 14 100 0 1 165 311169 311333 Thermus brockianus strain GE-1 chromosome, complete genome blastn 5984 228 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus brockianus
19496065 19496065 PRJNA270367_P_NODE_38676_length_171_cov_1.295082_g38471_i0 PRJNA270367 38676 171 1.295082 2.21459022 Mesotoga sp. 2053577 Bacteria Bacteria 81.3 3.63e-16   NR MCB1222954.1 2053577 g38471 i0 72.7 1.92982456140351 55 15 96.5 0 169 5 165 219 MCB1222954.1 molecular chaperone DnaK [Mesotoga sp.] diamond 330 81.3 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
27421923 27421923 PRJNA270367_P_NODE_43283_length_165_cov_1.077586_g43078_i0 PRJNA270367 43283 165 1.077586 1.7780169 Deinococcus misasensis 392413 Bacteria Bacteria 43.9 0.00524   NR WP_034336163.1 392413 g43078 i0 45 0.727272727272727 40 22 72.7 0 159 40 330 369 WP_034336163.1 thiol-activated cytolysin family protein [Deinococcus misasensis] diamond 120 43.9 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus misasensis
32746859 32746859 PRJNA270367_P_NODE_18960_length_280_cov_1.125541_g18755_i0 PRJNA270367 18960 280 1.125541 3.1515148 root 1 Root_unresolved Root_unresolved 45.1 0.00913   NR MBI5813055.1 52022 g18755 i0 50 1.03928571428571 32 16 34.3 0 16 111 828 859 MBI5813055.1 S8 family serine peptidase [Allomeiothermus silvanus] diamond 291 45.1 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Allomeiothermus Allomeiothermus silvanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;