contig_metadata
12 rows where bioproject = "PRJNA270367", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2333479 | 2333479 | PRJNA270367_P_NODE_36362_length_179_cov_1.200000_g36157_i0 | PRJNA270367 | 36362 | 179 | 1.2 | 2.148 | root | 1 | Root_unresolved | Root_unresolved | 105 | 1.71e-24 | NR | HIW36787.1 | 2838769 | g36157 | i0 | 74.1 | 15.6368715083799 | 58 | 15 | 97.2 | 0 | 178 | 5 | 43 | 100 | HIW36787.1 methionine--tRNA ligase [Candidatus Treponema faecavium] | diamond | 2799 | 105 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Candidatus Treponema faecavium | ||
| 26630887 | 26630887 | PRJNA270367_P_NODE_10241_length_415_cov_2.846995_g10039_i0 | PRJNA270367 | 10241 | 415 | 2.846995 | 11.81502925 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 67.8 | 3.69e-12 | NR | MCB1177358.1 | 2026757 | g10039 | i0 | 49.1 | 0.412048192771084 | 57 | 27 | 41.2 | 1 | 202 | 372 | 2 | 56 | MCB1177358.1 hypothetical protein [Leptospiraceae bacterium] | diamond | 171 | 67.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 26979080 | 26979080 | PRJNA270367_P_NODE_19802_length_272_cov_1.170404_g19597_i0 | PRJNA270367 | 19802 | 272 | 1.170404 | 3.18349888 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 43.5 | 0.0269 | NR | GHV56008.1 | 2053615 | g19597 | i0 | 42.9 | 0.540441176470588 | 49 | 28 | 54 | 0 | 25 | 171 | 233 | 281 | GHV56008.1 hypothetical protein AGMMS49579_20070 [Spirochaetia bacterium] | diamond | 147 | 43.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 27958446 | 27958446 | PRJNA270367_P_NODE_22345_length_249_cov_1.030000_g22140_i0 | PRJNA270367 | 22345 | 249 | 1.03 | 2.5647 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 82.8 | 3.04e-17 | NR | MCK5673392.1 | 2026792 | g22140 | i0 | 48.5 | 4.18072289156626 | 68 | 35 | 81.9 | 0 | 205 | 2 | 42 | 109 | MCK5673392.1 bifunctional nicotinamidase/pyrazinamidase [Spirochaetales bacterium] | diamond | 1041 | 82.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 29649197 | 29649197 | PRJNA270367_P_NODE_20010_length_270_cov_0.941176_g19805_i0 | PRJNA270367 | 20010 | 270 | 0.941176 | 2.5411752 | Bacteria | 2 | Bacteria | Bacteria | 44.7 | 0.00994 | NR | WP_020985739.1 | 408139 | g19805 | i0 | 56.3 | 1.81111111111111 | 32 | 14 | 35.6 | 0 | 5 | 100 | 286 | 317 | WP_020985739.1 alpha/beta fold hydrolase [Leptospira kmetyi] | diamond | 489 | 44.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira kmetyi | ||
| 29979252 | 29979252 | PRJNA270367_P_NODE_11551_length_388_cov_0.861357_g11349_i0 | PRJNA270367 | 11551 | 388 | 0.861357 | 3.34206516 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 193 | 1.39e-59 | NR | GHU57880.1 | 2053615 | g11349 | i0 | 87.3 | 0.850515463917526 | 110 | 13 | 84.3 | 1 | 60 | 386 | 10 | 119 | GHU57880.1 3-methyladenine DNA glycosylase [Spirochaetia bacterium] | diamond | 330 | 193 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 29979274 | 29979274 | PRJNA270367_P_NODE_45391_length_163_cov_0.912281_g45186_i0 | PRJNA270367 | 45391 | 163 | 0.912281 | 1.48701803 | Exilispira sp. | 2699745 | Bacteria | Bacteria | 97.4 | 6.0400000000000005e-22 | NR | HPC38989.1 | 2699745 | g45186 | i0 | 90.6 | 12.6625766871166 | 53 | 5 | 97.5 | 0 | 3 | 161 | 458 | 510 | HPC38989.1 aldehyde dehydrogenase family protein [Exilispira sp.] | diamond | 2064 | 97.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Exilispira | Exilispira sp. | |||
| 30358903 | 30358903 | PRJNA270367_P_NODE_31812_length_196_cov_1.061224_g31607_i0 | PRJNA270367 | 31812 | 196 | 1.061224 | 2.07999904 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 139 | 2.48e-39 | NR | GHT92957.1 | 2053615 | g31607 | i0 | 98.5 | 0.994897959183674 | 65 | 1 | 99.5 | 0 | 2 | 196 | 15 | 79 | GHT92957.1 hypothetical protein FACS1894140_5680 [Spirochaetia bacterium] | diamond | 195 | 139 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 30642603 | 30642603 | PRJNA270367_P_NODE_13653_length_352_cov_1.033003_g13448_i0 | PRJNA270367 | 13653 | 352 | 1.033003 | 3.63617056 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 53.5 | 1.8e-5 | NR | MCB1190498.1 | 2026757 | g13448 | i0 | 36.3 | 2.89772727272727 | 113 | 65 | 95.5 | 5 | 341 | 6 | 197 | 303 | MCB1190498.1 CAP domain-containing protein [Leptospiraceae bacterium] | diamond | 1020 | 53.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 30737413 | 30737413 | PRJNA270367_P_NODE_29994_length_204_cov_0.883871_g29789_i0 | PRJNA270367 | 29994 | 204 | 0.883871 | 1.80309684 | Treponema sp. | 166 | Bacteria | Bacteria | 65.9 | 7.18e-11 | NR | MBQ9205232.1 | 166 | g29789 | i0 | 51.7 | 5.22058823529412 | 60 | 29 | 88.2 | 0 | 1 | 180 | 186 | 245 | MBQ9205232.1 CAP domain-containing protein [Treponema sp.] | diamond | 1065 | 65.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 31369876 | 31369876 | PRJNA270367_P_NODE_45776_length_163_cov_0.912281_g45571_i0 | PRJNA270367 | 45776 | 163 | 0.912281 | 1.48701803 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 45.8 | 9.02e-5 | NR | MCB1177358.1 | 2026757 | g45571 | i0 | 60.6 | 0.607361963190184 | 33 | 11 | 60.7 | 1 | 100 | 2 | 1 | 31 | MCB1177358.1 hypothetical protein [Leptospiraceae bacterium] | diamond | 99 | 45.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 32634469 | 32634469 | PRJNA270367_P_NODE_37820_length_174_cov_1.104000_g37615_i0 | PRJNA270367 | 37820 | 174 | 1.104 | 1.92096 | Leptospira adleri | 2023186 | Bacteria | Bacteria | 42.7 | 0.0143 | NR | WP_135690460.1 | 2023186 | g37615 | i0 | 35 | 1.03448275862069 | 60 | 35 | 98.3 | 2 | 2 | 172 | 161 | 219 | WP_135690460.1 aldose 1-epimerase [Leptospira adleri] | diamond | 180 | 42.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira adleri |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;