RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA270367", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA270367 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29189984 29189984 PRJNA270367_P_NODE_33309_length_190_cov_1.255319_g33104_i0 PRJNA270367 33309 190 1.255319 2.3851061 Thermoplasmatota archaeon 2806419 Archaea Archaea 67 2.55e-11   NR MED5308108.1 2806419 g33104 i0 55.2 8.24210526315789 58 26 91.6 0 9 182 194 251 MED5308108.1 hypothetical protein [Thermoplasmatota archaeon] diamond 1566 67 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32445483 32445483 PRJNA270367_P_NODE_30879_length_200_cov_1.046358_g30674_i0 PRJNA270367 30879 200 1.046358 2.092716 Thermoplasmatales archaeon BRNA1 1054217 Archaea Archaea 53.1 3.07e-6   NR AGI48002.1 1054217 g30674 i0 41.5 0.795 53 31 79.5 0 193 35 142 194 AGI48002.1 Sel1 repeat protein [Thermoplasmatales archaeon BRNA1] diamond 159 53.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon BRNA1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;