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contig_metadata

12 rows where bioproject = "PRJNA270367" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 12 ✖

bioproject 1

  • PRJNA270367 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
370180 370180 PRJNA270367_P_NODE_44861_length_164_cov_0.904348_g44656_i0 PRJNA270367 44861 164 0.904348 1.48313072 Thermococcus sp. 9oN-7 103799 Archaea Archaea 298 1.59e-76   NTclustered gi|1197451|gb|U47108.1|TSU47108 103799 g44656 i0 99.39 26.6463414634146 164 1 100 0 1 164 1144 981 Thermococcus sp. DNA polymerase A (PolA) gene, complete cds blastn 4370 298 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. 9oN-7
7435549 7435549 PRJNA270367_P_NODE_13866_length_348_cov_1.565217_g13661_i0 PRJNA270367 13866 348 1.565217 5.44695516 root 1 Root_unresolved Root_unresolved 139 1.69e-36   NR MBN1134025.1 1945595 g13661 i0 71.6 2.0948275862069 81 23 69.8 0 2 244 337 417 MBN1134025.1 deoxyribodipyrimidine photo-lyase [Methanosarcinaceae archaeon] diamond 729 139 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae   Methanosarcinaceae archaeon
27042441 27042441 PRJNA270367_P_NODE_2842_length_820_cov_5.133593_g2666_i0 PRJNA270367 2842 820 5.133593 42.0954626 Haloarculaceae archaeon 2497615 Archaea Archaea 87 7.38e-16   NR MFB6074683.1 2497615 g2666 i0 34 0.581707317073171 159 99 56.7 4 66 530 49 205 MFB6074683.1 DUF4397 domain-containing protein [Haloarculaceae archaeon] diamond 477 87 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae   Haloarculaceae archaeon
27105453 27105453 PRJNA270367_P_NODE_33002_length_191_cov_1.464789_g32797_i0 PRJNA270367 33002 191 1.464789 2.79774699 Methanosphaera sp. 2666342 Archaea Archaea 43.5 0.00976   NR MEE3419418.1 2666342 g32797 i0 48.6 0.958115183246073 35 18 55 0 107 3 73 107 MEE3419418.1 phospholipid scramblase-related protein [Methanosphaera sp.] diamond 183 43.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
27168658 27168658 PRJNA270367_P_NODE_36442_length_179_cov_0.861538_g36237_i0 PRJNA270367 36442 179 0.861538 1.54215302 unclassified Halobellus 2638438 Archaea Archaea 59.7 1.14e-8   NR WP_313689274.1 2638438 g36237 i0 51.7 4.72625698324022 58 28 97.2 0 175 2 36 93 WP_313689274.1 MULTISPECIES: DUF4397 domain-containing protein [unclassified Halobellus] diamond 846 59.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobellus  
27453469 27453469 PRJNA270367_P_NODE_38483_length_172_cov_0.861789_g38278_i0 PRJNA270367 38483 172 0.861789 1.48227708 Natronorubrum sediminis 640943 Archaea Archaea 48.9 8.52e-5   NR WP_090508439.1 640943 g38278 i0 42.4 2.07558139534884 59 30 95.9 1 8 172 82 140 WP_090508439.1 SDR family NAD(P)-dependent oxidoreductase [Natronorubrum sediminis] diamond 357 48.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum sediminis
27502732 27502732 PRJNA270367_P_NODE_41183_length_167_cov_1.542373_g40978_i0 PRJNA270367 41183 167 1.542373 2.57576291 Methanobacteriati 3366610 Archaea Archaea 64.7 2.37e-10   NR MBI20538.1 2026739 g40978 i0 60.4 1.90419161676647 53 20 95.2 1 167 9 438 489 MBI20538.1 hypothetical protein [Methanobacteriota archaeon] diamond 318 64.7 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29189984 29189984 PRJNA270367_P_NODE_33309_length_190_cov_1.255319_g33104_i0 PRJNA270367 33309 190 1.255319 2.3851061 Thermoplasmatota archaeon 2806419 Archaea Archaea 67 2.55e-11   NR MED5308108.1 2806419 g33104 i0 55.2 8.24210526315789 58 26 91.6 0 9 182 194 251 MED5308108.1 hypothetical protein [Thermoplasmatota archaeon] diamond 1566 67 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
31496344 31496344 PRJNA270367_P_NODE_27876_length_214_cov_1.260606_g27671_i0 PRJNA270367 27876 214 1.260606 2.69769684 Methanobacteriota archaeon 2026739 Archaea Archaea 53.5 3.87e-6   NR MBR68958.1 2026739 g27671 i0 42 0.967289719626168 69 39 96.7 1 1 207 159 226 MBR68958.1 hypothetical protein [Methanobacteriota archaeon] diamond 207 53.5 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31559624 31559624 PRJNA270367_P_NODE_7396_length_497_cov_2.301339_g7198_i0 PRJNA270367 7396 497 2.301339 11.43765483 Methanosarcina sp. MTP4 1434100 Archaea Archaea 64.7 1.07e-8   NR WP_231582917.1 1434100 g7198 i0 43.7 0.428571428571429 71 39 42.9 1 220 432 380 449 WP_231582917.1 DUF4139 domain-containing protein [Methanosarcina sp. MTP4] diamond 213 64.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. MTP4
32445483 32445483 PRJNA270367_P_NODE_30879_length_200_cov_1.046358_g30674_i0 PRJNA270367 30879 200 1.046358 2.092716 Thermoplasmatales archaeon BRNA1 1054217 Archaea Archaea 53.1 3.07e-6   NR AGI48002.1 1054217 g30674 i0 41.5 0.795 53 31 79.5 0 193 35 142 194 AGI48002.1 Sel1 repeat protein [Thermoplasmatales archaeon BRNA1] diamond 159 53.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon BRNA1
32697612 32697612 PRJNA270367_P_NODE_45240_length_163_cov_0.929825_g45035_i0 PRJNA270367 45240 163 0.929825 1.51561475 Halosimplex carlsbadense 171164 Archaea Archaea 60.8 5.17e-9   NR WP_082223303.1 171164 g45035 i0 47.2 1.89570552147239 53 28 97.5 0 162 4 424 476 WP_082223303.1 G8 domain-containing protein [Halosimplex carlsbadense] diamond 309 60.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex carlsbadense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;