RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA270367", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA270367 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15672713 15672713 PRJNA270367_P_NODE_2573_length_863_cov_12.073710_g2403_i0 PRJNA270367 2573 863 12.07371 104.1961173 Eukaryota 2759 Fungi Fungi 407 6.849999999999999e-141   NR EPZ33659.1 988480 g2403 i0 77.2 7.92236384704519 250 57 86.9 0 840 91 1 250 EPZ33659.1 60S ribosomal protein L8 [Rozella allomycis CSF55] diamond 6837 407 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30958793 30958793 PRJNA270367_P_NODE_24274_length_234_cov_3.486486_g24069_i0 PRJNA270367 24274 234 3.486486 8.15837724 Rozella allomycis CSF55 988480 Fungi Fungi 82 8.96e-17   NR EPZ34692.1 988480 g24069 i0 66.2 4.02564102564103 65 21 82.1 1 212 21 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 82 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31654104 31654104 PRJNA270367_P_NODE_30197_length_203_cov_0.974026_g29992_i0 PRJNA270367 30197 203 0.974026 1.97727278 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 124 4.19e-32   NR PJF18189.1 1246581 g29992 i0 82.1 1.96551724137931 67 12 99 0 3 203 251 317 PJF18189.1 S-(hydroxymethyl)glutathione dehydrogenase [Paramicrosporidium saccamoebae] diamond 399 124 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
32508799 32508799 PRJNA270367_P_NODE_37499_length_175_cov_1.238095_g37294_i0 PRJNA270367 37499 175 1.238095 2.16666625 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 83.2 8.28e-19   NR PJF18805.1 1246581 g37294 i0 83 0.908571428571429 53 9 90.9 0 172 14 56 108 PJF18805.1 40S ribosomal protein S24 [Paramicrosporidium saccamoebae] diamond 159 83.2 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;