RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA270367", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA270367 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26598911 26598911 PRJNA270367_P_NODE_7921_length_479_cov_1.623256_g7723_i0 PRJNA270367 7921 479 1.623256 7.77539624 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 67.8 4.65e-10   NR HLJ55541.1 2739509 g7723 i0 36.7 2.83716075156576 150 73 87.1 5 56 472 145 283 HLJ55541.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 1359 67.8 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
27516402 27516402 PRJNA270367_P_NODE_28843_length_209_cov_1.106250_g28638_i0 PRJNA270367 28843 209 1.10625 2.3120625 Armatimonadota bacterium 2033014 Bacteria Bacteria 43.1 0.0179   NR MBM3475666.1 2033014 g28638 i0 47.9 0.688995215311005 48 24 67.5 1 178 38 8 55 MBM3475666.1 hypothetical protein [Armatimonadota bacterium] diamond 144 43.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30408028 30408028 PRJNA270367_P_NODE_18673_length_283_cov_1.209402_g18468_i0 PRJNA270367 18673 283 1.209402 3.42260766 FCB group 1783270 Bacteria Bacteria 81.6 2.44e-16   NR MFM9871988.1 2682144 g18468 i0 38.7 6.34982332155477 93 54 97.5 2 3 278 8 98 MFM9871988.1 glycine-rich domain-containing protein [Fimbriimonadaceae bacterium] diamond 1797 82.4 0.990291262135922 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;