RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA270367", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA270367 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29694689 29694689 PRJNA270367_P_NODE_34690_length_185_cov_1.147059_g34485_i0 PRJNA270367 34690 185 1.147059 2.12205915 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 87.4 2.58e-18   NR ETO23305.1 46433 g34485 i0 63.9 0.989189189189189 61 20 98.9 1 3 185 163 221 ETO23305.1 Leucyl-tRNA synthetase, partial [Reticulomyxa filosa] diamond 183 87.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31654099 31654099 PRJNA270367_P_NODE_23917_length_237_cov_1.382979_g23712_i0 PRJNA270367 23917 237 1.382979 3.27766023 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 89.7 9.65e-19   NR ETO19934.1 46433 g23712 i0 54.5 1.89873417721519 77 33 94.9 1 225 1 2 78 ETO19934.1 hypothetical protein RFI_17287, partial [Reticulomyxa filosa] diamond 450 89.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;