RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA270367", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA270367 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27611252 27611252 PRJNA270367_P_NODE_16284_length_312_cov_0.984791_g16079_i0 PRJNA270367 16284 312 0.984791 3.07254792 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 48.9 5.23e-4   NR MCX8065279.1 2030809 g16079 i0 48 1.49038461538462 50 26 48.1 0 59 208 58 107 MCX8065279.1 pyridoxal phosphate-dependent aminotransferase [Candidatus Hydrogenedentota bacterium] diamond 465 48.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28148032 28148032 PRJNA270367_P_NODE_18845_length_281_cov_1.788793_g18640_i0 PRJNA270367 18845 281 1.788793 5.02650833 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 90.9 7e-19   NR MCH7959314.1 2030809 g18640 i0 46.7 1.78291814946619 92 47 96.1 1 271 2 615 706 MCH7959314.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Hydrogenedentota bacterium] diamond 501 90.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;