RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA270367", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Woeseibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA270367 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27105469 27105469 PRJNA270367_P_NODE_46122_length_162_cov_1.380531_g45917_i0 PRJNA270367 46122 162 1.380531 2.23646022 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 46.6 4.94e-4   NR HRN71286.1 2026804 g45917 i0 51.6 0.574074074074074 31 15 57.4 0 112 20 138 168 HRN71286.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 93 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
30769226 30769226 PRJNA270367_P_NODE_24354_length_234_cov_1.248649_g24149_i0 PRJNA270367 24354 234 1.248649 2.92183866 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 57.4 1.64e-7   NR HRN71286.1 2026804 g24149 i0 47.8 0.858974358974359 67 34 85.9 1 201 1 48 113 HRN71286.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 201 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
31464736 31464736 PRJNA270367_P_NODE_24916_length_230_cov_2.337017_g24711_i0 PRJNA270367 24916 230 2.337017 5.3751391 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 117 1.43e-32   NR MBP9798444.1 2026804 g24711 i0 79.4 0.88695652173913 68 14 88.7 0 229 26 8 75 MBP9798444.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 204 117 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
32065473 32065473 PRJNA270367_P_NODE_12878_length_365_cov_1.382911_g12674_i0 PRJNA270367 12878 365 1.382911 5.04762515 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 49.7 4.11e-4   NR HRN71286.1 2026804 g12674 i0 35.2 0.723287671232877 88 51 67.4 2 119 364 1 88 HRN71286.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 264 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;