RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA270367", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA270367 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27313245 27313245 PRJNA270367_P_NODE_44383_length_164_cov_0.904348_g44178_i0 PRJNA270367 44383 164 0.904348 1.48313072 Bacteria 2 Bacteria Bacteria 42 0.0242   NR HUG62420.1 2072417 g44178 i0 58.8 2.15853658536585 34 14 62.2 0 133 32 141 174 HUG62420.1 bifunctional metallophosphatase/5'-nucleotidase [Candidatus Methylomirabilota bacterium] diamond 354 42.4 0.990566037735849 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29617660 29617660 PRJNA270367_P_NODE_40790_length_168_cov_0.873950_g40585_i0 PRJNA270367 40790 168 0.87395 1.468236 Pseudomonadati 3379134 Bacteria Bacteria 71.2 1.17e-12   NR HUO42744.1 2072417 g40585 i0 63.6 6.92857142857143 55 19 96.4 1 166 5 402 456 HUO42744.1 magnesium-translocating P-type ATPase [Candidatus Methylomirabilota bacterium] diamond 1164 71.6 0.994413407821229 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;