RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA263496" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA263496 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
369112 369112 PRJNA263496_P_NODE_16141_length_194_cov_1.406897_g15888_i0 PRJNA263496 16141 194 1.406897 2.72938018 Umbelopsis ramanniana 41833 Fungi Fungi 128 2.6999999999999997e-25   NTclustered gi|2323685029|ref|XM_051587689.1| 1314678 g15888 i0 91.398 24.5824742268041 93 8 48 0 80 172 205 297 Umbelopsis ramanniana AG uncharacterized protein (K450DRAFT_233049), mRNA blastn 4769 128 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis ramanniana
6159993 6159993 PRJNA263496_P_NODE_15625_length_197_cov_3.236486_g15372_i0 PRJNA263496 15625 197 3.236486 6.37587742 Fungi 4751 Fungi Fungi 363 6.939999999999998e-96   NTclustered gi|658131632|emb|HF968958.1| 4874 g15372 i0 100 139.939086294416 196 0 99 0 1 196 2001 2196 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 27568 363 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
8022747 8022747 PRJNA263496_P_NODE_22287_length_165_cov_1.758621_g22034_i0 PRJNA263496 22287 165 1.758621 2.90172465 Rhizophagus irregularis 588596 Fungi Fungi 145 2.21e-30   NTclustered gi|2749829731|ref|XM_066144963.1| 588596 g22034 i0 82.822 8.08484848484848 163 26 98 2 1 162 288 449 Rhizophagus irregularis ribosomal protein S15 (OCT59_022754), mRNA blastn 1334 145 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
8022830 8022830 PRJNA263496_P_NODE_25687_length_161_cov_0.910714_g25434_i0 PRJNA263496 25687 161 0.910714 1.46624954 Mycotypha africana 64632 Fungi Fungi 52.8 0.013   NTclustered gi|2432566207|ref|XM_053078878.1| 64632 g25434 i0 100 0.173913043478261 28 0 17 0 17 44 784 811 Mycotypha africana uncharacterized protein (BDF20DRAFT_835808), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
19494874 19494874 PRJNA263496_P_NODE_10356_length_245_cov_1.561224_g10103_i0 PRJNA263496 10356 245 1.561224 3.8249988 Mucor velutinosus 708070 Fungi Fungi 159 1.27e-34   NTclustered gi|2724905161|ref|XM_064829308.1| 708070 g10103 i0 80.882 67.8 204 37 83 2 32 234 1285 1083 Mucor velutinosus Subunit of heteropentameric Replication factor C (RF-C) (RFC2), partial mRNA blastn 16611 159 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
28432093 28432093 PRJNA263496_P_NODE_25026_length_162_cov_0.902655_g24773_i0 PRJNA263496 25026 162 0.902655 1.4623011 Hesseltinella vesiculosa 101127 Fungi Fungi 69.3 4.69e-12   NR ORX59461.1 101127 g24773 i0 66 1.85185185185185 50 17 92.6 0 11 160 136 185 ORX59461.1 60S ribosomal protein L3 [Hesseltinella vesiculosa] diamond 300 69.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Hesseltinella Hesseltinella vesiculosa
31861655 31861655 PRJNA263496_P_NODE_14777_length_203_cov_1.376623_g14524_i0 PRJNA263496 14777 203 1.376623 2.79454469 Fungi 4751 Fungi Fungi 83.2 1.24e-16   NR CAG8601089.1 144539 g14524 i0 55.2 7.77339901477832 67 28 96.1 1 195 1 220 286 CAG8601089.1 3576_t:CDS:10, partial [Paraglomus occultum] diamond 1578 83.6 0.995215311004785 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Paraglomerales Paraglomeraceae Paraglomus Paraglomus occultum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;