RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where bioproject = "PRJNA263496" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 28 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA263496 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2919736 2919736 PRJNA263496_P_NODE_13943_length_209_cov_1.768750_g13690_i0 PRJNA263496 13943 209 1.76875 3.6966875 Rasamsonia byssochlamydoides 89139 Fungi Fungi 100 6.45e-17   NTclustered gi|2837856384|ref|XM_069425115.1| 89139 g13690 i0 83.333 2.75598086124402 108 18 52 0 40 147 25 132 Rasamsonia byssochlamydoides 60S ribosomal protein eL39 (VTN77DRAFT_860), partial mRNA blastn 576 100 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Trichocomaceae Rasamsonia Rasamsonia byssochlamydoides
2920325 2920325 PRJNA263496_P_NODE_9703_length_254_cov_0.960976_g9450_i0 PRJNA263496 9703 254 0.960976 2.44087904 Ascochyta rabiei 5454 Fungi Fungi 176 1.31e-39   NTclustered gi|1955494155|ref|XM_038937035.1| 5454 g9450 i0 84.444 51.7716535433071 180 26 70 2 76 254 245 67 Ascochyta rabiei RNA helicase (EKO05_0000631), partial mRNA blastn 13150 176 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Ascochyta Ascochyta rabiei
5472357 5472357 PRJNA263496_P_NODE_1105_length_883_cov_1.949640_g959_i0 PRJNA263496 1105 883 1.94964 17.2153212 Fungi 4751 Fungi Fungi 371 1.28e-123   NR NP_594440.1 4896 g959 i0 60.2 112.984144960362 294 112 99.9 1 882 1 4 292 NP_594440.1 translation elongation factor EF-1 alpha Ef1a-b [Schizosaccharomyces pombe] diamond 99765 374 0.991978609625668 Eukaryota Opisthokonta Fungi Ascomycota Schizosaccharomycetes Schizosaccharomycetales Schizosaccharomycetaceae Schizosaccharomyces Schizosaccharomyces pombe
5472758 5472758 PRJNA263496_P_NODE_24325_length_163_cov_0.894737_g24072_i0 PRJNA263496 24325 163 0.894737 1.45842131 Lithohypha guttulata 1690604 Fungi Fungi 291 2.64e-74   NTclustered gi|2725214432|ref|XM_064894595.1| 1690604 g24072 i0 98.773 1 163 2 100 0 1 163 1413 1251 Lithohypha guttulata uncharacterized protein (LTR64_000209), partial mRNA blastn 163 291 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Lithohypha Lithohypha guttulata
6159996 6159996 PRJNA263496_P_NODE_21665_length_166_cov_1.307692_g21412_i0 PRJNA263496 21665 166 1.307692 2.17076872 Cladosporium 5498 Fungi Fungi 307 2.69e-79   NTclustered gi|34304222|gb|AY291273.1| 29917 g21412 i0 100 99.9879518072289 166 0 100 0 1 166 457 292 Cladosporium cladosporioides strain ALI 50 small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 16598 307 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
8022829 8022829 PRJNA263496_P_NODE_25627_length_161_cov_0.910714_g25374_i0 PRJNA263496 25627 161 0.910714 1.46624954 Didymella exigua 100019 Fungi Fungi 259 7.34e-65   NTclustered gi|1832860506|ref|XM_033587190.1| 1150837 g25374 i0 95.652 1.93167701863354 161 7 100 0 1 161 628 788 Didymella exigua CBS 183.55 uncharacterized protein (M421DRAFT_110675), mRNA blastn 311 259 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Didymella Didymella exigua
9297071 9297071 PRJNA263496_P_NODE_12168_length_224_cov_2.485714_g11915_i0 PRJNA263496 12168 224 2.485714 5.56799936 Opisthokonta 33154 Fungi Fungi 113 7.9e-30   NR KAJ1337677.1 5520 g11915 i0 80.3 869.008928571429 66 13 88.4 0 3 200 110 175 KAJ1337677.1 histone H4 [Microdochium nivale] diamond 194658 114 0.991228070175439 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Microdochiaceae Microdochium Microdochium nivale
9297460 9297460 PRJNA263496_P_NODE_24968_length_162_cov_0.902655_g24715_i0 PRJNA263496 24968 162 0.902655 1.4623011 Aureobasidium namibiae 559561 Fungi Fungi 108 2.84e-19   NTclustered gi|918800255|ref|XM_013568445.1| 1043004 g24715 i0 86.139 3.02469135802469 101 12 62 2 63 162 1 100 Aureobasidium namibiae CBS 147.97 uncharacterized protein (M436DRAFT_55443), partial mRNA blastn 490 108 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Dothideales Saccotheciaceae Aureobasidium Aureobasidium namibiae
11260400 11260400 PRJNA263496_P_NODE_2249_length_614_cov_9.162832_g568_i1 PRJNA263496 2249 614 9.162832 56.25978848 Didymellaceae 683158 Fungi Fungi 1118 0   NTclustered gi|162415180|gb|EU167600.1| 5454 g568 i1 99.511 99.814332247557 614 3 100 0 1 614 2774 2161 Ascochyta rabiei strain CBS 237.37 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 61286 1129 0.990256864481842 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Ascochyta Ascochyta rabiei
11847768 11847768 PRJNA263496_P_NODE_16490_length_192_cov_1.174825_g16237_i0 PRJNA263496 16490 192 1.174825 2.255664 Kazachstania africana 432096 Fungi Fungi 143 9.539999999999999e-30   NTclustered gi|410078589|ref|XM_003956827.1| 1071382 g16237 i0 82.822 39.796875 163 24 84 4 26 186 10 170 Kazachstania africana CBS 2517 actin (KAFR0D00940), partial mRNA blastn 7641 143 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Kazachstania Kazachstania africana
13123134 13123134 PRJNA263496_P_NODE_21831_length_166_cov_0.871795_g21578_i0 PRJNA263496 21831 166 0.871795 1.4471797 Aureobasidium melanogenum 46634 Fungi Fungi 283 4.53e-72   NTclustered gi|2028509357|ref|XM_041026332.1| 1043003 g21578 i0 97.576 0.993975903614458 165 4 99 0 1 165 165 1 Aureobasidium melanogenum CBS 110374 uncharacterized protein (M437DRAFT_74973), partial mRNA blastn 165 283 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Dothideales Saccotheciaceae Aureobasidium Aureobasidium melanogenum
13123195 13123195 PRJNA263496_P_NODE_24071_length_163_cov_0.894737_g23818_i0 PRJNA263496 24071 163 0.894737 1.45842131 Penicillium angulare 116970 Fungi Fungi 113 6.14e-21   NTclustered gi|2515012955|ref|XM_056929387.1| 116970 g23818 i0 87.129 10.9509202453988 101 11 61 2 51 150 138 39 Penicillium angulare uncharacterized protein (N7478_013177), partial mRNA blastn 1785 113 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium angulare
13810651 13810651 PRJNA263496_P_NODE_23751_length_163_cov_1.464912_g23498_i0 PRJNA263496 23751 163 1.464912 2.38780656 Eukaryota 2759 Fungi Fungi 302 1.22e-77   NTclustered gi|2532687033|gb|OR243761.1| 29917 g23498 i0 100 99.4539877300613 163 0 100 0 1 163 3721 3883 Cladosporium cladosporioides strain DSM 104381 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16211 302 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
14398094 14398094 PRJNA263496_P_NODE_13412_length_213_cov_2.762195_g13159_i0 PRJNA263496 13412 213 2.762195 5.88347535 Phoma sp. 1 OB-2014 1573585 Fungi Fungi 383 5.8499999999999996e-102   NTclustered gi|724090723|gb|KM387394.1| 1573585 g13159 i0 99.061 108.741784037559 213 2 100 0 1 213 7258 7470 Phoma sp. 1 OB-2014 28S-18S ribosomal RNA intergenic spacer, partial sequence; 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 23162 383 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Phoma Phoma sp. 1 OB-2014
15084768 15084768 PRJNA263496_P_NODE_14852_length_203_cov_0.961039_g14599_i0 PRJNA263496 14852 203 0.961039 1.95090917 Dothideomycetes 147541 Fungi Fungi 193 9.99e-45   NTclustered gi|2749640508|ref|XR_010715598.1| 5022 g14599 i0 98.182 58.8866995073892 110 2 54 0 94 203 3418 3309 Leptosphaeria maculans 28S ribosomal RNA (IAQ61_009836), rRNA blastn 11954 193 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Leptosphaeriaceae Plenodomus Plenodomus lingam
15084782 15084782 PRJNA263496_P_NODE_9232_length_260_cov_2.293839_g8979_i0 PRJNA263496 9232 260 2.293839 5.9639814 Cladosporium 5498 Fungi Fungi 481 2.55e-131   NTclustered gi|283827952|gb|EU019262.2| 29917 g8979 i0 100 76.2692307692308 260 0 100 0 1 260 2999 3258 Cladosporium cladosporioides strain CBS 109.21 28S large subunit ribosomal RNA gene, partial sequence blastn 19830 481 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
16359669 16359669 PRJNA263496_P_NODE_11353_length_232_cov_2.748634_g11100_i0 PRJNA263496 11353 232 2.748634 6.37683088 Fungi 4751 Fungi Fungi 429 8.2e-116   NTclustered gi|33302361|gb|AY337712.1| 73001 g11100 i0 100 100 232 0 100 0 1 232 133 364 Phoma herbarum 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 23200 429 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Phoma Phoma herbarum
16946388 16946388 PRJNA263496_P_NODE_12834_length_218_cov_3.621302_g12581_i0 PRJNA263496 12834 218 3.621302 7.89443836 Clavispora lusitaniae 36911 Fungi Fungi 158 3.969999999999999e-34   NTclustered gi|2749661533|ref|XM_002614449.2| 36911 g12581 i0 86.207 87.2660550458716 145 20 93 0 16 160 1141 997 Clavispora lusitaniae Ubiquitin (UBI4), partial mRNA blastn 19024 158 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Metschnikowiaceae Clavispora Clavispora lusitaniae
17634826 17634826 PRJNA263496_P_NODE_15274_length_200_cov_1.059603_g15021_i0 PRJNA263496 15274 200 1.059603 2.119206 Ascochyta 5453 Fungi Fungi 337 4.28e-88   NTclustered gi|2289385083|gb|CP095310.1| 5454 g15021 i0 97.03 75.115 202 3 100 3 1 200 699 499 Ascochyta rabiei isolate Me14 mitochondrion, complete genome blastn 15023 337 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Ascochyta Ascochyta rabiei
18221044 18221044 PRJNA263496_P_NODE_24295_length_163_cov_0.894737_g24042_i0 PRJNA263496 24295 163 0.894737 1.45842131 Alternaria alternata 5599 Fungi Fungi 302 1.22e-77   NTclustered gi|1070559059|ref|XM_018525719.1| 5599 g24042 i0 100 12.0736196319018 163 0 100 0 1 163 141 303 Alternaria alternata hypothetical protein mRNA blastn 1968 302 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
22734018 22734018 PRJNA263496_P_NODE_15158_length_200_cov_11.112583_g14905_i0 PRJNA263496 15158 200 11.112583 22.225166 Dothideomycetes 147541 Fungi Fungi 370 4.22e-98   NTclustered gi|33302361|gb|AY337712.1| 73001 g14905 i0 100 100 200 0 100 0 1 200 1620 1421 Phoma herbarum 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20000 370 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Phoma Phoma herbarum
23321425 23321425 PRJNA263496_P_NODE_25859_length_161_cov_0.910714_g25606_i0 PRJNA263496 25859 161 0.910714 1.46624954 Starmerella bombicola 75736 Fungi Fungi 130 6.01e-26   NTclustered gi|390195319|gb|JQ699088.1| 75736 g25606 i0 81.595 92.7888198757764 163 24 99 6 2 161 7 166 Starmerella bombicola strain NRRL Y-17069 translation elongation factor 1-alpha gene, partial cds blastn 14939 130 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales Trichomonascaceae Starmerella Starmerella bombicola
24595605 24595605 PRJNA263496_P_NODE_25440_length_161_cov_0.910714_g25187_i0 PRJNA263496 25440 161 0.910714 1.46624954 Lachnellula hyalina 1316788 Fungi Fungi 158 2.76e-34   NTclustered gi|1759127801|ref|XM_031149836.1| 1316788 g25187 i0 85.065 64.5403726708075 154 23 96 0 7 160 961 808 Lachnellula hyalina ATP synthase subunit beta, mitochondrial (atp-2), partial mRNA blastn 10391 158 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Lachnaceae Lachnellula Lachnellula hyalina
29473701 29473701 PRJNA263496_P_NODE_22470_length_165_cov_0.879310_g22217_i0 PRJNA263496 22470 165 0.87931 1.4508615 Cladosporium halotolerans 1052096 Fungi Fungi 53.1 2.67e-6   NR XP_069232173.1 1052096 g22217 i0 59.3 0.981818181818182 54 3 98.2 1 3 164 4 38 XP_069232173.1 uncharacterized protein WHR41_02285 [Cladosporium halotolerans] diamond 162 53.1 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
29789579 29789579 PRJNA263496_P_NODE_24331_length_163_cov_0.894737_g24078_i0 PRJNA263496 24331 163 0.894737 1.45842131 Plenodomus tracheiphilus IPT5 1408161 Fungi Fungi 120 5.54e-33   NR KAF2851163.1 1408161 g24078 i0 98.1 2.92638036809816 53 1 97.5 0 159 1 86 138 KAF2851163.1 AN1-type zinc finger protein-like protein [Plenodomus tracheiphilus IPT5] diamond 477 120 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Leptosphaeriaceae Plenodomus Plenodomus tracheiphilus
30421958 30421958 PRJNA263496_P_NODE_13453_length_213_cov_1.451220_g13200_i0 PRJNA263496 13453 213 1.45122 3.0910986 Fusarium flagelliforme 2675880 Fungi Fungi 42.4 0.0322   NR XP_045977701.1 2675880 g13200 i0 32.7 0.732394366197183 52 35 73.2 0 164 9 45 96 XP_045977701.1 uncharacterized protein B0J16DRAFT_389244 [Fusarium flagelliforme] diamond 156 42.4 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium flagelliforme
32273338 32273338 PRJNA263496_P_NODE_20358_length_170_cov_1.685950_g20105_i0 PRJNA263496 20358 170 1.68595 2.866115 Fungi 4751 Fungi Fungi 74.7 9.04e-15   NR EFQ91734.1 861557 g20105 i0 61.8 14.4882352941176 55 21 97.1 0 168 4 54 108 EFQ91734.1 hypothetical protein PTT_11324 [Pyrenophora teres f. teres 0-1] diamond 2463 75.1 0.994673768308922 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Pyrenophora Pyrenophora teres
32305061 32305061 PRJNA263496_P_NODE_23219_length_164_cov_0.886957_g22966_i0 PRJNA263496 23219 164 0.886957 1.45460948 Eukaryota 2759 Fungi Fungi 40.8 0.0479   NR KAG9802206.1 46634 g22966 i0 67.9 2.70731707317073 28 9 51.2 0 88 5 137 164 KAG9802206.1 eukaryotic translation initiation factor 3, partial [Aureobasidium melanogenum] diamond 444 41.2 0.990291262135922 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Dothideales Saccotheciaceae Aureobasidium Aureobasidium melanogenum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;