RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA263496", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA263496 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8022588 8022588 PRJNA263496_P_NODE_16847_length_190_cov_1.085106_g16594_i0 PRJNA263496 16847 190 1.085106 2.0617014 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 209 9.15e-50   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g16594 i0 89.697 18.2421052631579 165 15 86 2 1 163 3557564 3557728 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 3466 209 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28576021 28576021 PRJNA263496_P_NODE_25327_length_161_cov_0.910714_g25074_i0 PRJNA263496 25327 161 0.910714 1.46624954 root 1 Root_unresolved Root_unresolved 42 0.0232   NR MBN2317464.1 1978231 g25074 i0 39.6 2.4223602484472 48 26 89.4 1 11 154 152 196 MBN2317464.1 glycosyltransferase family 39 protein [Acidobacteriota bacterium] diamond 390 42.4 0.990566037735849 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;