RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA263496" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 3 ✖

bioproject 1

  • PRJNA263496 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29758025 29758025 PRJNA263496_P_NODE_4431_length_404_cov_1.977465_g4178_i0 PRJNA263496 4431 404 1.977465 7.9889586 Emiliania huxleyi CCMP1516 280463 Haptophyta other_Eukaryota 102 1.38e-24   NR XP_005778651.1 280463 g4178 i0 39.8 0.987623762376238 133 68 98.8 2 403 5 2 122 XP_005778651.1 hypothetical protein EMIHUDRAFT_73627, partial [Emiliania huxleyi CCMP1516] diamond 399 102 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
29947710 29947710 PRJNA263496_P_NODE_23991_length_163_cov_0.894737_g23738_i0 PRJNA263496 23991 163 0.894737 1.45842131 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 45.1 2.48e-4   NR KAJ1624170.1 483367 g23738 i0 44.7 1.65644171779141 47 23 86.5 1 142 2 2 45 KAJ1624170.1 Tim10/DDP family zinc finger protein [Pavlovales sp. CCMP2436] diamond 270 45.1 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436
31956607 31956607 PRJNA263496_P_NODE_22037_length_166_cov_0.871795_g21784_i0 PRJNA263496 22037 166 0.871795 1.4471797 Prymnesium 35143 Haptophyta other_Eukaryota 45.1 0.00201   NR KAL1515685.1 97485 g21784 i0 47.8 1.66265060240964 46 24 83.1 0 26 163 62 107 KAL1515685.1 hypothetical protein AB1Y20_002302 [Prymnesium parvum] diamond 276 45.1 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;