RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA263496" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA263496 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27706227 27706227 PRJNA263496_P_NODE_18564_length_180_cov_1.351145_g18311_i0 PRJNA263496 18564 180 1.351145 2.432061 Minisyncoccota bacterium 2053589 Bacteria Bacteria 41.6 0.00854   NR MFA6050621.1 2053589 g18311 i0 40 0.916666666666667 55 32 90 1 162 1 6 60 MFA6050621.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 165 41.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31274687 31274687 PRJNA263496_P_NODE_25615_length_161_cov_0.910714_g25362_i0 PRJNA263496 25615 161 0.910714 1.46624954 Patescibacteria group bacterium 2052139 Bacteria Bacteria 41.6 0.0229   NR MDE2590790.1 2052139 g25362 i0 43.2 0.819875776397516 44 25 82 0 3 134 130 173 MDE2590790.1 NAD(P)H-dependent oxidoreductase [Patescibacteria group bacterium] diamond 132 41.6 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;