RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA255848" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA255848 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
368622 368622 PRJNA255848_P_NODE_1_length_7218_cov_116.411354_g0_i0 PRJNA255848 1 7218 116.411354 8402.57153172 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2909 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g0 i0 96.128 0.666666666666667 1782 66 67 3 5432 7212 5329 7108 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4812 2909 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
5472056 5472056 PRJNA255848_P_NODE_36445_length_167_cov_0.864407_g36127_i0 PRJNA255848 36445 167 0.864407 1.44355969 Zebrafish picornavirus 1 2304617 Viruses Viruses 281 1.64e-71   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g36127 i0 97.006 3 167 5 100 0 1 167 3606 3440 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 501 281 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
28053059 28053059 PRJNA255848_P_NODE_47685_length_161_cov_0.910714_g47367_i0 PRJNA255848 47685 161 0.910714 1.46624954 Suillus luteus hypovirus 1 3067807 Viruses Viruses 102 8.53e-24   NR WLK77429.1 3067807 g47367 i0 98.1 0.987577639751553 53 1 98.8 0 161 3 1872 1924 WLK77429.1 polyprotein, partial [Suillus luteus hypovirus 1] diamond 159 102 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae   Suillus luteus hypovirus 1
28810554 28810554 PRJNA255848_P_NODE_43528_length_163_cov_0.894737_g43210_i0 PRJNA255848 43528 163 0.894737 1.45842131 Manglie virus 2562519 Viruses Viruses 51.6 9.13e-6   NR QBR99594.1 2562519 g43210 i0 57.5 2.13496932515337 40 17 73.6 0 161 42 1480 1519 QBR99594.1 hypothetical protein [Manglie virus] diamond 348 51.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales     Manglie virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;