RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA255848" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA255848 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28179183 28179183 PRJNA255848_P_NODE_12126_length_292_cov_3.748971_g11808_i0 PRJNA255848 12126 292 3.748971 10.94699532 African cichlid piscichuvirus 3065075 Viruses Viruses 57.8 3.67e-7   NR UVF58767.1 3065075 g11808 i0 43.8 1.42808219178082 73 40 74 1 5 220 10 82 UVF58767.1 MAG: L protein [Salarius guttatus piscichuvirus] diamond 417 57.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
31559588 31559588 PRJNA255848_P_NODE_2336_length_745_cov_1.952586_g2078_i0 PRJNA255848 2336 745 1.952586 14.5467657 African cichlid piscichuvirus 3065075 Viruses Viruses 125 1.31e-28   NR WLN26256.1 3065075 g2078 i0 44.1 0.583892617449664 145 81 58.4 0 723 289 90 234 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 435 125 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;