RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA255848", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA255848 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27281529 27281529 PRJNA255848_P_NODE_24683_length_201_cov_0.888158_g24365_i0 PRJNA255848 24683 201 0.888158 1.78519758 Metazoa 33208 Annelida Annelida 128 1.09e-34   NR CAH1778036.1 6347 g24365 i0 96.8 128.791044776119 63 2 94 0 13 201 106 168 CAH1778036.1 unnamed protein product, partial [Owenia fusiformis] diamond 25887 129 0.992248062015504 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
27502718 27502718 PRJNA255848_P_NODE_27143_length_191_cov_1.267606_g26825_i0 PRJNA255848 27143 191 1.267606 2.42112746 root 1 Root_unresolved Root_unresolved 135 6.69e-39   NR ABB29582.1 6359 g26825 i0 98.4 258.267015706806 63 1 99 0 2 190 30 92 ABB29582.1 cell division control protein 42, partial [Platynereis dumerilii] diamond 49329 136 0.992647058823529 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
27534141 27534141 PRJNA255848_P_NODE_32423_length_174_cov_1.632000_g32105_i0 PRJNA255848 32423 174 1.632 2.83968 Metazoa 33208 Annelida Annelida 113 2.99e-29   NR XP_009024801.1 6412 g32105 i0 100 201.465517241379 57 0 98.3 0 173 3 170 226 XP_009024801.1 hypothetical protein HELRODRAFT_155141 [Helobdella robusta] diamond 35055 113 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
32020025 32020025 PRJNA255848_P_NODE_42498_length_163_cov_2.236842_g42180_i0 PRJNA255848 42498 163 2.236842 3.64605246 root 1 Root_unresolved Root_unresolved 67.4 2.39e-12   NR CAH1776354.1 6347 g42180 i0 100 114.625766871166 36 0 66.3 0 3 110 119 154 CAH1776354.1 unnamed protein product [Owenia fusiformis] diamond 18684 67.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
32241790 32241790 PRJNA255848_P_NODE_21958_length_213_cov_0.932927_g21640_i0 PRJNA255848 21958 213 0.932927 1.98713451 Metazoa 33208 Annelida Annelida 147 6.87e-41   NR XP_009015254.1 6412 g21640 i0 97.1 878.450704225352 70 2 98.6 0 212 3 196 265 XP_009015254.1 hypothetical protein HELRODRAFT_186366 [Helobdella robusta] diamond 187110 148 0.993243243243243 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
32368301 32368301 PRJNA255848_P_NODE_30779_length_179_cov_1.461538_g30461_i0 PRJNA255848 30779 179 1.461538 2.61615302 Metazoa 33208 Annelida Annelida 114 9.979999999999999e-30   NR CAH1780222.1 6347 g30461 i0 100 137.966480446927 56 0 93.9 0 168 1 90 145 CAH1780222.1 unnamed protein product [Owenia fusiformis] diamond 24696 114 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;