contig_metadata
10 rows where bioproject = "PRJNA255848" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2919332 | 2919332 | PRJNA255848_P_NODE_29863_length_182_cov_1.180451_g29545_i0 | PRJNA255848 | 29863 | 182 | 1.180451 | 2.14842082 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 326 | 8.260000000000001e-85 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g29545 | i0 | 98.901 | 280.126373626374 | 182 | 2 | 100 | 0 | 1 | 182 | 220318 | 220137 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 50983 | 326 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 3607500 | 3607500 | PRJNA255848_P_NODE_39563_length_165_cov_0.879310_g39245_i0 | PRJNA255848 | 39563 | 165 | 0.87931 | 1.4508615 | Cetobacterium | 180162 | Bacteria | Bacteria | 272 | 9.73e-69 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g39245 | i0 | 96.386 | 91.7939393939394 | 166 | 4 | 100 | 2 | 1 | 165 | 16185 | 16021 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 15146 | 272 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 5472004 | 5472004 | PRJNA255848_P_NODE_21945_length_213_cov_0.987805_g21627_i0 | PRJNA255848 | 21945 | 213 | 0.987805 | 2.10402465 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 388 | 1.26e-103 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g21627 | i0 | 99.531 | 368.112676056338 | 213 | 1 | 100 | 0 | 1 | 213 | 499431 | 499219 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 78408 | 388 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 8022071 | 8022071 | PRJNA255848_P_NODE_28207_length_187_cov_2.137681_g27889_i0 | PRJNA255848 | 28207 | 187 | 2.137681 | 3.99746347 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 324 | 3.07e-84 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g27889 | i0 | 97.861 | 150.79679144385 | 187 | 4 | 100 | 0 | 1 | 187 | 1757249 | 1757435 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 28199 | 324 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 9985077 | 9985077 | PRJNA255848_P_NODE_37368_length_166_cov_0.871795_g37050_i0 | PRJNA255848 | 37368 | 166 | 0.871795 | 1.4471797 | Fusobacterium | 848 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2269773925|gb|CP100429.1| | 76857 | g37050 | i0 | 100 | 70.6686746987952 | 166 | 0 | 100 | 0 | 1 | 166 | 527310 | 527475 | Fusobacterium polymorphum strain SSMR1 chromosome, complete genome | blastn | 11731 | 307 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 11847292 | 11847292 | PRJNA255848_P_NODE_28330_length_187_cov_1.420290_g28012_i0 | PRJNA255848 | 28330 | 187 | 1.42029 | 2.6559423 | Leptotrichia shahii | 157691 | Bacteria | Bacteria | 335 | 1.4199999999999996e-87 | NTclustered | gi|1708568515|dbj|AP019827.1| | 157691 | g28012 | i0 | 98.93 | 91.7433155080214 | 187 | 2 | 100 | 0 | 1 | 187 | 94414 | 94600 | Leptotrichia shahii JCM16776 DNA, complete genome | blastn | 17156 | 335 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia shahii | ||
| 12535438 | 12535438 | PRJNA255848_P_NODE_17090_length_241_cov_1.864583_g16772_i0 | PRJNA255848 | 17090 | 241 | 1.864583 | 4.49364503 | Leptotrichia | 32067 | Bacteria | Bacteria | 316 | 6.97e-82 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g16772 | i0 | 94.608 | 341.203319502075 | 204 | 11 | 85 | 0 | 38 | 241 | 1168 | 965 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 82230 | 316 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 16945980 | 16945980 | PRJNA255848_P_NODE_29954_length_182_cov_1.075188_g29636_i0 | PRJNA255848 | 29954 | 182 | 1.075188 | 1.95684216 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 331 | 1.7800000000000002e-86 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g29636 | i0 | 99.451 | 15.8846153846154 | 182 | 1 | 100 | 0 | 1 | 182 | 763907 | 763726 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 2891 | 331 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 17634597 | 17634597 | PRJNA255848_P_NODE_37614_length_166_cov_0.871795_g37296_i0 | PRJNA255848 | 37614 | 166 | 0.871795 | 1.4471797 | Leptotrichia | 32067 | Bacteria | Bacteria | 296 | 5.82e-76 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g37296 | i0 | 98.795 | 2 | 166 | 2 | 100 | 0 | 1 | 166 | 257918 | 257753 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 332 | 296 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 30421950 | 30421950 | PRJNA255848_P_NODE_43973_length_163_cov_0.894737_g43655_i0 | PRJNA255848 | 43973 | 163 | 0.894737 | 1.45842131 | unclassified Cetobacterium | 2630983 | Bacteria | Bacteria | 97.8 | 4.39e-24 | NR | WP_047384111.1 | 2630983 | g43655 | i0 | 100 | 0.993865030674847 | 54 | 0 | 99.4 | 0 | 2 | 163 | 23 | 76 | WP_047384111.1 MULTISPECIES: OmpH family outer membrane protein [unclassified Cetobacterium] | diamond | 162 | 97.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;