RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA255848", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA255848 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28084626 28084626 PRJNA255848_P_NODE_33425_length_171_cov_1.663934_g33107_i0 PRJNA255848 33425 171 1.663934 2.84532714 Basidiobolus ranarum 34480 Fungi Fungi 53.1 6.62e-7   NR KAK9687038.1 34480 g33107 i0 70.9 2.91228070175439 55 16 96.5 0 2 166 83 137 KAK9687038.1 ribosomal protein P0 (A0) (L10E) [Basidiobolus ranarum] diamond 498 53.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
30895658 30895658 PRJNA255848_P_NODE_47274_length_161_cov_0.910714_g46956_i0 PRJNA255848 47274 161 0.910714 1.46624954 Thamnocephalis sphaerospora 78915 Fungi Fungi 43.5 0.00432   NR RKP11065.1 78915 g46956 i0 52.9 0.633540372670807 34 16 63.4 0 2 103 134 167 RKP11065.1 Nat13 protein [Thamnocephalis sphaerospora] diamond 102 43.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Sigmoideomycetaceae Thamnocephalis Thamnocephalis sphaerospora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;