RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA255848" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA255848 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30863817 30863817 PRJNA255848_P_NODE_37374_length_166_cov_0.871795_g37056_i0 PRJNA255848 37374 166 0.871795 1.4471797 Halobellus clavatus 660517 Archaea Archaea 44.3 0.0038   NR WP_089768463.1 660517 g37056 i0 45.3 0.957831325301205 53 29 95.8 0 8 166 287 339 WP_089768463.1 MFS transporter [Halobellus clavatus] diamond 159 44.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobellus Halobellus clavatus
31401442 31401442 PRJNA255848_P_NODE_35356_length_167_cov_0.864407_g35038_i0 PRJNA255848 35356 167 0.864407 1.44355969 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 41.2 0.0482   NR NJD76264.1 2032688 g35038 i0 45 0.718562874251497 40 22 71.9 0 23 142 4430 4469 NJD76264.1 hypothetical protein [Candidatus Methanoperedens sp.] diamond 120 41.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
31654074 31654074 PRJNA255848_P_NODE_18237_length_233_cov_1.336957_g17919_i0 PRJNA255848 18237 233 1.336957 3.11510981 Halorussus 1070314 Archaea Archaea 43.5 0.0174   NR WP_115795885.1 1070314 g17919 i0 44.2 0.991416309012876 77 32 96.6 4 2 226 283 350 WP_115795885.1 MULTISPECIES: ABC transporter permease [Halorussus] diamond 231 43.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus  
32603256 32603256 PRJNA255848_P_NODE_41120_length_164_cov_0.886957_g40802_i0 PRJNA255848 41120 164 0.886957 1.45460948 Halopenitus sp. 1979403 Archaea Archaea 111 6.28e-29   NR MFB6236241.1 1979403 g40802 i0 98.1 0.98780487804878 54 1 98.8 0 163 2 116 169 MFB6236241.1 hypothetical protein [Halopenitus sp.] diamond 162 111 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halopenitus Halopenitus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;