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contig_metadata

12 rows where bioproject = "PRJNA255848" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 12 ✖

bioproject 1

  • PRJNA255848 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
368670 368670 PRJNA255848_P_NODE_33901_length_170_cov_1.264463_g33583_i0 PRJNA255848 33901 170 1.264463 2.1495871 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 265 1.68e-66   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g33583 i0 94.706 213.158823529412 170 9 100 0 1 170 962288 962457 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 36237 265 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
1643547 1643547 PRJNA255848_P_NODE_44682_length_162_cov_1.318584_g44364_i0 PRJNA255848 44682 162 1.318584 2.13610608 Candidatus Saccharibacteria bacterium RAAC3_TM7_1 1394711 Bacteria Bacteria 220 3.49e-53   NTclustered gi|563353835|gb|CP006915.1| 1394711 g44364 i0 91.824 360.469135802469 159 11 98 2 5 162 450319 450162 Candidatus Saccharibacteria bacterium RAAC3_TM7_1, complete genome blastn 58396 220 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RAAC3_TM7_1
4195770 4195770 PRJNA255848_P_NODE_21624_length_214_cov_1.539394_g21306_i0 PRJNA255848 21624 214 1.539394 3.29430316 Bacteria 2 Bacteria Bacteria 140 1.58e-38   NR MCL5011141.1 2052139 g21306 i0 84.1 9.67289719626168 69 11 96.7 0 6 212 182 250 MCL5011141.1 helix-turn-helix domain-containing protein [Patescibacteria group bacterium] diamond 2070 140 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
8022119 8022119 PRJNA255848_P_NODE_37207_length_166_cov_0.871795_g36889_i0 PRJNA255848 37207 166 0.871795 1.4471797 Candidatus Nanogingivalaceae bacterium 2725942 Bacteria Bacteria 296 5.82e-76   NTclustered gi|2070571752|gb|CP072208.2| 2725942 g36889 i0 98.795 71.9096385542169 166 2 100 0 1 166 113046 112881 MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome blastn 11937 296 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Nanosyncoccalia Candidatus Nanogingivales Candidatus Nanogingivalaceae   Candidatus Nanogingivalaceae bacterium
8022185 8022185 PRJNA255848_P_NODE_8007_length_376_cov_1.232416_g7689_i0 PRJNA255848 8007 376 1.232416 4.63388416 candidate division CPR1 bacterium ADurb.Bin16 1618338 Bacteria Bacteria 204 2.01e-62   NR OQB40762.1 1852826 g7689 i0 82.3 0.98936170212766 124 20 98.9 1 374 3 44 165 OQB40762.1 MAG: putative transposase [candidate division CPR1 bacterium ADurb.Bin160] diamond 372 204 1 Bacteria Bacteria candidate phyla   candidate division CPR1         candidate division CPR1 bacterium ADurb.Bin160
14397692 14397692 PRJNA255848_P_NODE_26512_length_193_cov_1.729167_g26194_i0 PRJNA255848 26512 193 1.729167 3.33729231 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 313 6.91e-81   NTclustered gi|837350690|gb|CP011211.1| 1619070 g26194 i0 95.855 126.295336787565 193 8 100 0 1 193 850677 850869 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 24375 313 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
19494621 19494621 PRJNA255848_P_NODE_41096_length_164_cov_0.886957_g40778_i0 PRJNA255848 41096 164 0.886957 1.45460948 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 265 1.6199999999999998e-66   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g40778 i0 95.732 127.115853658537 164 7 100 0 1 164 667477 667640 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 20847 265 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
23320662 23320662 PRJNA255848_P_NODE_18139_length_234_cov_1.091892_g17821_i0 PRJNA255848 18139 234 1.091892 2.55502728 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 320 5.1999999999999994e-83   NTclustered gi|1474570736|gb|CP023991.1| 2026720 g17821 i0 91.453 62.0470085470085 234 19 100 1 1 234 883918 884150 Candidatus Saccharibacteria bacterium isolate CG19_WC_8_21_14_NA_150_51_44 chromosome, complete genome blastn 14519 320 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27073993 27073993 PRJNA255848_P_NODE_5682_length_463_cov_1.367150_g5365_i0 PRJNA255848 5682 463 1.36715 6.3299045 Candidatus Microgenomates bacterium 2093373 Bacteria Bacteria 47.4 0.00786   NR RJQ35878.1 2093373 g5365 i0 33.3 0.660907127429806 102 51 55.1 2 461 207 126 227 RJQ35878.1 MAG: hypothetical protein C4559_05970 [Candidatus Microgenomates bacterium] diamond 306 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         Candidatus Microgenomates bacterium
27737723 27737723 PRJNA255848_P_NODE_35904_length_167_cov_0.864407_g35586_i0 PRJNA255848 35904 167 0.864407 1.44355969 Candidatus Hydrothermia bacterium 3014280 Bacteria Bacteria 86.3 1.24e-18   NR HOP33351.1 3014280 g35586 i0 66.7 0.970059880239521 54 18 97 0 2 163 68 121 HOP33351.1 DNA adenine methylase [Candidatus Hydrothermia bacterium] diamond 162 86.3 1 Bacteria Bacteria candidate phyla   Candidatus Hydrothermota Candidatus Hydrothermia       Candidatus Hydrothermia bacterium
29032173 29032173 PRJNA255848_P_NODE_19088_length_228_cov_0.921788_g18770_i0 PRJNA255848 19088 228 0.921788 2.10167664 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 44.3 0.00286   NR HEX9409770.1 2072417 g18770 i0 33.9 1.55263157894737 59 37 77.6 1 47 223 54 110 HEX9409770.1 RidA family protein [Candidatus Methylomirabilota bacterium] diamond 354 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31812417 31812417 PRJNA255848_P_NODE_26057_length_195_cov_1.280822_g25739_i0 PRJNA255848 26057 195 1.280822 2.4976029 Patescibacteria group bacterium 2052139 Bacteria Bacteria 44.3 0.00475   NR MEK7184073.1 2052139 g25739 i0 40.6 0.984615384615385 64 28 96.9 2 195 7 97 151 MEK7184073.1 dTMP kinase [Patescibacteria group bacterium] diamond 192 44.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;