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contig_metadata

21 rows where bioproject = "PRJNA242641" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA242641 · 21 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
367431 367431 PRJNA242641_S_NODE_2321_length_153_cov_23.862903_g2293_i0 PRJNA242641 2321 153 23.862903 36.51024159 Exophiala xenobiotica 348802 Fungi Fungi 267 4.1099999999999994e-67   NTclustered gi|915144019|ref|XR_001230708.1| 348802 g2293 i0 98.039 91.7581699346405 153 3 100 0 1 153 2042 2194 Exophiala xenobiotica 28S ribosomal RNA (PV05_12071), rRNA blastn 14039 267 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala xenobiotica
2331934 2331934 PRJNA242641_S_NODE_1422_length_194_cov_11.787879_g1394_i0 PRJNA242641 1422 194 11.787879 22.86848526 Ascomycota 4890 Fungi Fungi 344 2.4699999999999993e-90   NTclustered gi|1040726|emb|X80705.1| 5584 g1394 i0 98.469 101.046391752577 196 1 100 2 1 194 547 742 E.jeanselmei 18S rRNA gene blastn 19603 344 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala jeanselmei
2331935 2331935 PRJNA242641_S_NODE_2222_length_157_cov_2.648438_g2194_i0 PRJNA242641 2222 157 2.648438 4.15804766 Ascomycota 4890 Fungi Fungi 291 2.52e-74   NTclustered gi|2217003555|gb|ON153388.1| 34409 g2194 i0 100 100.343949044586 157 0 100 0 1 157 124 280 Colletotrichum sp. isolate PT1838 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15754 291 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum sp.
4194532 4194532 PRJNA242641_S_NODE_744_length_265_cov_17.639831_g716_i0 PRJNA242641 744 265 17.639831 46.74555215 Phialophora verrucosa 39412 Fungi Fungi 289 1.6999999999999995e-73   NTclustered gi|336088197|dbj|AB550776.1| 39412 g716 i0 86.792 89.7849056603774 265 28 99 6 4 265 4293 4033 Phialophora verrucosa genes for ITS1, 5.8S rRNA, ITS2 and large subunit rRNA, partial and complete sequence, strain: IFM 5089 blastn 23793 289 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Phialophora Phialophora verrucosa
6745102 6745102 PRJNA242641_S_NODE_1346_length_199_cov_21.694118_g1318_i0 PRJNA242641 1346 199 21.694118 43.17129482 Exophiala xenobiotica 348802 Fungi Fungi 353 4.23e-93   NTclustered gi|915144019|ref|XR_001230708.1| 348802 g1318 i0 98.507 99.9597989949749 201 1 100 1 1 199 2243 2443 Exophiala xenobiotica 28S ribosomal RNA (PV05_12071), rRNA blastn 19892 353 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala xenobiotica
7434588 7434588 PRJNA242641_S_NODE_1146_length_213_cov_43.782609_g1118_i0 PRJNA242641 1146 213 43.782609 93.25695717 Fungi 4751 Fungi Fungi 377 2.72e-100   NTclustered gi|2582615798|ref|XR_009468002.1| 5061 g1118 i0 98.592 105.976525821596 213 3 100 0 1 213 2382 2594 Aspergillus niger 28S ribosomal RNA (28S rRNA), partial rRNA blastn 22573 377 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
7434589 7434589 PRJNA242641_S_NODE_1446_length_192_cov_30.742331_g1418_i0 PRJNA242641 1446 192 30.742331 59.02527552 Eurotiomycetes 147545 Fungi Fungi 342 8.759999999999999e-90   NTclustered gi|1929249871|gb|MN861684.1| 158046 g1418 i0 98.958 100 192 0 100 1 1 192 1184 1373 Phaeomoniella chlamydospora strain CBS 117197 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence. blastn 19200 342 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Phaeomoniellales Phaeomoniellaceae Phaeomoniella Phaeomoniella chlamydospora
8709356 8709356 PRJNA242641_S_NODE_1927_length_167_cov_12.014493_g1899_i0 PRJNA242641 1927 167 12.014493 20.06420331 Opisthokonta 33154 Fungi Fungi 309 7.53e-80   NTclustered gi|984294657|gb|KT390118.1| 41959 g1899 i0 100 100 167 0 100 0 1 167 1400 1234 Aspergillus penicillioides clone KJ34-0.2-39 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16700 309 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus penicillioides
8709358 8709358 PRJNA242641_S_NODE_2047_length_162_cov_9.857143_g2019_i0 PRJNA242641 2047 162 9.857143 15.96857166 root 1 Root_unresolved Root_unresolved 300 4.36e-77   NTclustered gi|358001635|gb|JN938999.1| 5054 g2019 i0 100 100 162 0 100 0 1 162 555 716 Eurotium amstelodami strain DAOM 222011 18S ribosomal RNA (SSU) gene, partial sequence blastn 16200 300 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus amstelodami
8709360 8709360 PRJNA242641_S_NODE_67_length_768_cov_21.606225_g58_i0 PRJNA242641 67 768 21.606225 165.935808 Ascomycota 4890 Fungi Fungi 937 0   NTclustered gi|1473257267|gb|MH870211.1| 5588 g58 i0 88.774 94.8854166666667 775 73 100 13 1 768 33 800 Rhinocladiella atrovirens culture CBS:291.65 strain CBS 291.65 large subunit ribosomal RNA gene, partial sequence blastn 72872 946 0.990486257928118 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Rhinocladiella Rhinocladiella atrovirens
11259873 11259873 PRJNA242641_S_NODE_1229_length_207_cov_5.073034_g1201_i0 PRJNA242641 1229 207 5.073034 10.50118038 root 1 Root_unresolved Root_unresolved 322 1.25e-83   NTclustered gi|1473255798|gb|MH868742.1| 5074 g1201 i0 98.37 88.719806763285 184 2 89 1 1 184 13 195 Penicillium brevicompactum culture CBS:287.53 strain CBS 287.53 large subunit ribosomal RNA gene, partial sequence blastn 18365 324 0.993827160493827 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium brevicompactum
12535256 12535256 PRJNA242641_S_NODE_1050_length_225_cov_53.841837_g1022_i0 PRJNA242641 1050 225 53.841837 121.14413325 Eurotiomycetes 147545 Fungi Fungi 383 6.25e-102   NTclustered gi|2588682|dbj|AB008413.1| 41063 g1022 i0 97.748 98.7288888888889 222 5 99 0 4 225 1377 1598 Aspergillus zonatus gene for 18S rRNA, partial sequence blastn 22214 383 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicilliopsis Penicilliopsis zonata
13810087 13810087 PRJNA242641_S_NODE_2251_length_156_cov_4.110236_g2223_i0 PRJNA242641 2251 156 4.1102359999999996 6.41196816 root 1 Root_unresolved Root_unresolved 283 4.1899999999999994e-72   NTclustered gi|1473257650|gb|MH870594.1| 5580 g2223 i0 99.363 100.641025641026 157 0 100 1 1 156 62 218 Aureobasidium pullulans culture CBS:110.67 strain CBS 110.67 large subunit ribosomal RNA gene, partial sequence blastn 15700 283 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Dothideales Saccotheciaceae Aureobasidium Aureobasidium pullulans
14396478 14396478 PRJNA242641_S_NODE_1412_length_195_cov_8.036145_g1384_i0 PRJNA242641 1412 195 8.036145 15.67048275 Penicillium solitum 60172 Fungi Fungi 344 2.48e-90   NTclustered gi|373938716|gb|JN642222.1| 60172 g1384 i0 98.462 97.9128205128205 195 3 100 0 1 195 5604 5410 Penicillium solitum strain 20-01 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 19093 344 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium solitum
14396479 14396479 PRJNA242641_S_NODE_1972_length_166_cov_2.854015_g1944_i0 PRJNA242641 1972 166 2.854015 4.7376649 Exophiala lecanii-corni 91925 Fungi Fungi 296 5.82e-76   NTclustered gi|1538946180|gb|CP034382.1| 91925 g1944 i0 98.795 103.602409638554 166 2 100 0 1 166 1669 1834 Exophiala lecanii-corni strain CBS 102400 mitochondrion, complete genome blastn 17198 296 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala lecanii-corni
14396480 14396480 PRJNA242641_S_NODE_672_length_281_cov_31.809524_g644_i0 PRJNA242641 672 281 31.809524 89.38476244 Neurospora crassa 5141 Fungi Fungi 56.5 0.002   NTclustered gi|18376239|emb|AL670009.1| 5141 g644 i0 100 0.106761565836299 30 0 11 0 7 36 68475 68504 Neurospora crassa DNA linkage group V cosmid contig 123A4 blastn 30 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Sordariaceae Neurospora Neurospora crassa
15084233 15084233 PRJNA242641_S_NODE_1052_length_225_cov_8.887755_g1024_i0 PRJNA242641 1052 225 8.887755 19.99744875 Dothideomycetes 147541 Fungi Fungi 353 4.9e-93   NTclustered gi|1407920319|gb|MF611880.1| 284138 g1024 i0 95.089 99.6133333333333 224 11 99 0 2 225 1762 1985 Hormonema carpetanum culture ATCC:74360 28S ribosomal RNA gene, complete sequence blastn 22413 353 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Dothideales Dothioraceae Hormonema Hormonema carpetanum
19493385 19493385 PRJNA242641_S_NODE_716_length_271_cov_15.991736_g688_i0 PRJNA242641 716 271 15.991736 43.33760456 Exophiala xenobiotica 348802 Fungi Fungi 490 4.44e-134   NTclustered gi|915144019|ref|XR_001230708.1| 348802 g688 i0 99.262 104.276752767528 271 2 100 0 1 271 2931 2661 Exophiala xenobiotica 28S ribosomal RNA (PV05_12071), rRNA blastn 28259 490 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala xenobiotica
21458396 21458396 PRJNA242641_S_NODE_1057_length_224_cov_27.343590_g1029_i0 PRJNA242641 1057 224 27.34359 61.2496416 Ascomycota 4890 Fungi Fungi 409 1.03e-109   NTclustered gi|5669766|gb|AF106013.1|AF106013 66520 g1029 i0 99.554 99.9866071428571 224 1 100 0 1 224 14 237 Tryblidiopsis pinastri small subunit ribosomal RNA gene, partial sequence blastn 22397 409 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Rhytismatales Rhytismataceae Tryblidiopsis Tryblidiopsis pinastri
21458399 21458399 PRJNA242641_S_NODE_1957_length_166_cov_18.905109_g1929_i0 PRJNA242641 1957 166 18.905109 31.38248094 Exophiala 5583 Fungi Fungi 291 2.7099999999999998e-74   NTclustered gi|459354703|gb|KC311483.1| 348802 g1929 i0 98.193 100 166 3 100 0 1 166 1207 1372 Exophiala xenobiotica isolate E30 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16600 291 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala xenobiotica
25282759 25282759 PRJNA242641_S_NODE_180_length_533_cov_21.980159_g58_i2 PRJNA242641 180 533 21.980159 117.15424747 Fungi 4751 Fungi Fungi 846 0   NTclustered gi|1104561736|gb|KY218668.1| 5075 g58 i2 95.31 99.9943714821764 533 25 100 0 1 533 1098 566 Penicillium camemberti strain IF2SW-F1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 53297 852 0.992957746478873 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium camemberti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;