RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA242641" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA242641 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13121237 13121237 PRJNA242641_S_NODE_1431_length_194_cov_3.484848_g1403_i0 PRJNA242641 1431 194 3.484848 6.76060512 Diuraphis noxia 143948 Arthropoda Arthropoda 56.5 0.001   NTclustered gi|985399333|ref|XM_015511795.1| 143948 g1403 i0 100 5.18556701030928 30 0 15 0 23 52 868 839 PREDICTED: Diuraphis noxia protein grainyhead (LOC107164101), mRNA blastn 1006 56.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aphididae Diuraphis Diuraphis noxia
23319487 23319487 PRJNA242641_S_NODE_2299_length_154_cov_5.192000_g2271_i0 PRJNA242641 2299 154 5.192 7.99568 Satyrium ilicis 876074 Arthropoda Arthropoda 52.8 0.013   NTclustered gi|2918386088|emb|OZ238121.1| 876074 g2271 i0 100 0.181818181818182 28 0 18 0 17 44 23317818 23317845 Satyrium ilicis genome assembly, chromosome: 12 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Lycaenidae Satyrium Satyrium ilicis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;