RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA242641" and tax_clade = "FCB group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA242641 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21458400 21458400 PRJNA242641_S_NODE_1977_length_166_cov_2.379562_g1949_i0 PRJNA242641 1977 166 2.379562 3.95007292 Cloacibacterium 501783 Bacteria Bacteria 285 1.26e-72   NTclustered gi|1527207946|gb|CP034157.1| 237258 g1949 i0 98.75 543.885542168675 160 2 96 0 1 160 130451 130292 Cloacibacterium normanense strain NRS-1 chromosome, complete genome blastn 90285 285 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium Cloacibacterium normanense
25282761 25282761 PRJNA242641_S_NODE_2080_length_161_cov_7.833333_g2052_i0 PRJNA242641 2080 161 7.833333 12.61166613 Cloacibacterium 501783 Bacteria Bacteria 279 5.64e-71   NTclustered gi|1527207946|gb|CP034157.1| 237258 g2052 i0 98.726 430.27950310559 157 2 98 0 5 161 130051 130207 Cloacibacterium normanense strain NRS-1 chromosome, complete genome blastn 69275 279 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium Cloacibacterium normanense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;