RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA235310" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA235310 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24593583 24593583 PRJNA235310_P_NODE_2960_length_221_cov_1.813953_g2934_i0 PRJNA235310 2960 221 1.813953 4.00883613 Rozella allomycis CSF55 988480 Fungi Fungi 80.9 2.1e-16   NR EPZ34692.1 988480 g2934 i0 66.2 4.26244343891403 65 21 86.9 1 214 23 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 80.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29537064 29537064 PRJNA235310_P_NODE_4530_length_175_cov_1.238095_g4504_i0 PRJNA235310 4530 175 1.238095 2.16666625 Rozella allomycis CSF55 988480 Fungi Fungi 73.2 9.41e-14   NR EPZ34692.1 988480 g4504 i0 63.2 1.95428571428571 57 19 94.3 1 11 175 191 247 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 342 73.2 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30895627 30895627 PRJNA235310_P_NODE_3614_length_199_cov_0.960000_g3588_i0 PRJNA235310 3614 199 0.96 1.9104 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 84.7 3.05e-17   NR PJF17710.1 1246581 g3588 i0 58.5 1.9748743718593 65 27 98 0 3 197 384 448 PJF17710.1 Aspartyl-tRNA synthetase, variant 2 [Paramicrosporidium saccamoebae] diamond 393 84.7 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
31369812 31369812 PRJNA235310_P_NODE_5756_length_165_cov_0.896552_g5730_i0 PRJNA235310 5756 165 0.896552 1.4793108 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 99.8 3.87e-23   NR PJF17770.1 1246581 g5730 i0 75.9 3.89090909090909 54 13 98.2 0 3 164 94 147 PJF17770.1 hypothetical protein PSACC_02387 [Paramicrosporidium saccamoebae] diamond 642 99.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
32083207 32083207 PRJNA235310_P_NODE_4598_length_174_cov_1.168000_g4572_i0 PRJNA235310 4598 174 1.168 2.03232 Opisthokonta 33154 Fungi Fungi 64.7 2.67e-10   NR EPZ31343.1 988480 g4572 i0 51.7 5.72413793103448 58 28 100 0 174 1 252 309 EPZ31343.1 DUF1900 domain-containing protein [Rozella allomycis CSF55] diamond 996 64.7 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;