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contig_metadata

32 rows where bioproject = "PRJNA235310" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 32 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA235310 · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
367323 367323 PRJNA235310_P_NODE_121_length_838_cov_8.074778_g105_i0 PRJNA235310 121 838 8.074778 67.66663964 Fungi 4751 Fungi Fungi 391 8.109999999999998e-135   NR KAI9005244.1 109897 g105 i0 72.8 38.1157517899761 250 68 89.5 0 818 69 1 250 KAI9005244.1 translation protein SH3-like domain-containing protein [Gaertneriomyces semiglobifer] diamond 31941 391 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gaertneriomyces Gaertneriomyces semiglobifer
4194419 4194419 PRJNA235310_P_NODE_144_length_798_cov_6.853138_g127_i0 PRJNA235310 144 798 6.853138 54.68804124 Chytridiomycetes 451435 Fungi Fungi 229 2.7e-71   NR KAJ1569731.1 1604274 g127 i0 53.4 5.83082706766917 221 103 83.1 0 772 110 1 221 KAJ1569731.1 40S ribosomal protein S6 [Cladochytrium tenue] diamond 4653 231 0.991341991341991 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium tenue
9295418 9295418 PRJNA235310_P_NODE_248_length_684_cov_5.946457_g227_i0 PRJNA235310 248 684 5.946457 40.67376588 Polychytrium aggregatum 110093 Fungi Fungi 195 1.07e-44   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g227 i0 76.238 20.3552631578947 404 74 58 16 218 613 523 134 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 13923 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
10571409 10571409 PRJNA235310_P_NODE_2669_length_234_cov_1.118919_g2643_i0 PRJNA235310 2669 234 1.118919 2.61827046 Fungi 4751 Fungi Fungi 121 7.93e-30   NR XP_052966189.1 110093 g2643 i0 81.2 15.2435897435897 69 13 88.5 0 232 26 2173 2241 XP_052966189.1 armadillo-type protein [Polychytrium aggregatum] diamond 3567 122 0.991803278688525 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
12535236 12535236 PRJNA235310_P_NODE_50_length_1151_cov_3.805808_g38_i0 PRJNA235310 50 1151 3.805808 43.80485008 Fungi 4751 Fungi Fungi 306 1.11e-98   NR XP_016612010.1 645134 g38 i0 57.8 9.44309296264118 329 123 85.8 6 16 1002 1 313 XP_016612010.1 guanine nucleotide-binding protein subunit beta-2-like 1 [Spizellomyces punctatus DAOM BR117] diamond 10869 309 0.990291262135922 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
13121192 13121192 PRJNA235310_P_NODE_51_length_1137_cov_2.748162_g39_i0 PRJNA235310 51 1137 2.748162 31.24660194 Borealophlyctis nickersoniae 2735257 Fungi Fungi 114 6.72e-24   NR KAJ3287084.1 2735257 g39 i0 62.1 0.25065963060686 95 34 25.1 1 856 572 287 379 KAJ3287084.1 hypothetical protein HK104_008770 [Borealophlyctis nickersoniae] diamond 285 114 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Borealophlyctidaceae Borealophlyctis Borealophlyctis nickersoniae
14396382 14396382 PRJNA235310_P_NODE_1932_length_284_cov_9.140426_g1906_i0 PRJNA235310 1932 284 9.140426 25.95880984 Polychytrium aggregatum 110093 Fungi Fungi 121 7.09e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g1906 i0 84.252 7.55985915492958 127 16 44 3 148 272 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2147 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
16944622 16944622 PRJNA235310_P_NODE_1934_length_284_cov_2.140426_g1908_i0 PRJNA235310 1934 284 2.140426 6.07880984 Globomycetaceae 1395670 Fungi Fungi 81.3 8.35e-16   NR OAJ44317.1 403673 g1908 i0 87.8 2.70422535211268 41 5 43.3 0 123 1 89 129 OAJ44317.1 rRNA 2'-O-methyltransferase fibrillarin [Batrachochytrium dendrobatidis JEL423] diamond 768 81.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
19493276 19493276 PRJNA235310_P_NODE_1136_length_376_cov_14.119266_g1110_i0 PRJNA235310 1136 376 14.119266 53.08844016 Fungi 4751 Fungi Fungi 138 6.829999999999999e-40   NR XP_052971640.1 110093 g1110 i0 76.7 20.1941489361702 86 20 68.6 0 22 279 4 89 XP_052971640.1 60S ribosomal protein L37 [Polychytrium aggregatum] diamond 7593 139 0.992805755395683 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19493314 19493314 PRJNA235310_P_NODE_2856_length_226_cov_0.881356_g2830_i0 PRJNA235310 2856 226 0.881356 1.99186456 Irineochytrium annulatum 109884 Fungi Fungi 99.8 2.57e-22   NR KAJ3193702.1 109884 g2830 i0 68 0.995575221238938 75 24 99.6 0 226 2 532 606 KAJ3193702.1 hypothetical protein HK101_004331 [Irineochytrium annulatum] diamond 225 99.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Irineochytrium Irineochytrium annulatum
20768891 20768891 PRJNA235310_P_NODE_3557_length_200_cov_1.105960_g3531_i0 PRJNA235310 3557 200 1.10596 2.21192 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 100 4.39e-23   NR KAH9253976.1 1357716 g3531 i0 73.8 0.975 65 17 97.5 0 5 199 310 374 KAH9253976.1 hypothetical protein BASA81_008100 [Batrachochytrium salamandrivorans] diamond 195 100 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
26630859 26630859 PRJNA235310_P_NODE_421_length_563_cov_9.951362_g397_i0 PRJNA235310 421 563 9.951362 56.02616806 Phlyctochytrium bullatum 1352834 Fungi Fungi 178 5.38e-54   NR KAJ3106498.1 1352834 g397 i0 64.4 1.41740674955595 132 46 70.3 1 20 415 1 131 KAJ3106498.1 60S ribosomal protein L32 [Phlyctochytrium bullatum] diamond 798 178 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium bullatum
26947345 26947345 PRJNA235310_P_NODE_6322_length_162_cov_0.920354_g6296_i0 PRJNA235310 6322 162 0.920354 1.49097348 Zopfochytrium polystomum 2211651 Fungi Fungi 68.2 9.67e-13   NR KAI9357676.1 2211651 g6296 i0 53.8 0.962962962962963 52 24 96.3 0 162 7 13 64 KAI9357676.1 ribosomal protein L14-domain-containing protein [Zopfochytrium polystomum] diamond 156 68.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Zopfochytrium Zopfochytrium polystomum
27010594 27010594 PRJNA235310_P_NODE_5902_length_164_cov_1.069565_g5876_i0 PRJNA235310 5902 164 1.069565 1.7540866 Phlyctochytrium planicorne 261098 Fungi Fungi 70.9 1.53e-12   NR KAJ3105268.1 261098 g5876 i0 59.2 2.6890243902439 49 20 89.6 0 148 2 697 745 KAJ3105268.1 hypothetical protein HDU97_008291 [Phlyctochytrium planicorne] diamond 441 70.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium planicorne
27755399 27755399 PRJNA235310_P_NODE_3844_length_193_cov_1.048611_g3818_i0 PRJNA235310 3844 193 1.048611 2.02381923 root 1 Root_unresolved Root_unresolved 42 0.0365   NR XP_016611390.1 645134 g3818 i0 44.7 2.89119170984456 38 21 59.1 0 190 77 74 111 XP_016611390.1 TKL protein kinase [Spizellomyces punctatus DAOM BR117] diamond 558 42.4 0.990566037735849 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
28228495 28228495 PRJNA235310_P_NODE_5406_length_167_cov_0.872881_g5380_i0 PRJNA235310 5406 167 0.872881 1.45771127 Fungi 4751 Fungi Fungi 112 1.89e-27   NR KAI8812918.1 109936 g5380 i0 89.1 82.9940119760479 55 6 98.8 0 166 2 319 373 KAI8812918.1 Biopterin-dependent aromatic amino acid hydroxylase-domain-containing protein [Cladochytrium replicatum] diamond 13860 113 0.991150442477876 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium replicatum
28891601 28891601 PRJNA235310_P_NODE_2908_length_224_cov_0.891429_g2882_i0 PRJNA235310 2908 224 0.891429 1.99680096 Powellomycetaceae 1134080 Fungi Fungi 62.8 2.52e-9   NR TPX56312.1 109895 g2882 i0 38.8 3.58928571428571 67 41 89.7 0 3 203 459 525 TPX56312.1 hypothetical protein PhCBS80983_g04635 [Powellomyces hirtus] diamond 804 62.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
29000715 29000715 PRJNA235310_P_NODE_6108_length_163_cov_0.912281_g6082_i0 PRJNA235310 6108 163 0.912281 1.48701803 Gonapodya sp. JEL 2107737 Fungi Fungi 44.3 0.00371   NR KAJ3340074.1 2725673 g6082 i0 44.4 0.993865030674847 54 28 95.7 1 156 1 1472 1525 KAJ3340074.1 hypothetical protein HDU93_007416 [Gonapodya sp. JEL0774] diamond 162 44.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Gonapodyaceae Gonapodya Gonapodya sp. JEL0774
29176128 29176128 PRJNA235310_P_NODE_2289_length_256_cov_1.400966_g2263_i0 PRJNA235310 2289 256 1.400966 3.58647296 Eukaryota 2759 Fungi Fungi 77.8 1.44e-14   NR KAJ3196043.1 109884 g2263 i0 57.6 4.11328125 59 25 69.1 0 252 76 297 355 KAJ3196043.1 hypothetical protein HK101_010283 [Irineochytrium annulatum] diamond 1053 78.2 0.994884910485933 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Irineochytrium Irineochytrium annulatum
29333857 29333857 PRJNA235310_P_NODE_1449_length_336_cov_1.031359_g1423_i0 PRJNA235310 1449 336 1.031359 3.46536624 Eukaryota 2759 Fungi Fungi 126 4.709999999999999e-31   NR RKO91200.1 388810 g1423 i0 56.3 3.57142857142857 96 42 85.7 0 35 322 584 679 RKO91200.1 Transketolase, thiamine diphosphate binding domain-containing protein [Blyttiomyces helicus] diamond 1200 126 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes     Blyttiomyces Blyttiomyces helicus
29726268 29726268 PRJNA235310_P_NODE_4170_length_184_cov_1.155556_g4144_i0 PRJNA235310 4170 184 1.155556 2.12622304 Irineochytrium annulatum 109884 Fungi Fungi 45.1 0.00131   NR KAJ3192701.1 109884 g4144 i0 67.7 0.505434782608696 31 9 50.5 1 3 95 128 157 KAJ3192701.1 ribosomal 40S subunit protein S11A [Irineochytrium annulatum] diamond 93 45.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Irineochytrium Irineochytrium annulatum
29789543 29789543 PRJNA235310_P_NODE_5391_length_167_cov_0.881356_g5365_i0 PRJNA235310 5391 167 0.881356 1.47186452 Dinochytrium kinnereticum 1774096 Fungi Fungi 70.1 2.97e-12   NR KAJ3203555.1 1774096 g5365 i0 70 0.898203592814371 50 15 89.8 0 3 152 398 447 KAJ3203555.1 putative choline transporter, neither null mutation nor overexpression affects choline transport [Dinochytrium kinnereticum] diamond 150 70.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Dinochytrium Dinochytrium kinnereticum
29821030 29821030 PRJNA235310_P_NODE_511_length_528_cov_0.964509_g487_i0 PRJNA235310 511 528 0.964509 5.09260752 Geranomyces michiganensis 1134077 Fungi Fungi 82.8 8.37e-15   NR KAJ3161708.1 1134077 g487 i0 35.7 1.78409090909091 157 94 86.4 5 511 56 656 810 KAJ3161708.1 karyopherin beta [Geranomyces michiganensis] diamond 942 82.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces michiganensis
30231961 30231961 PRJNA235310_P_NODE_4692_length_171_cov_1.475410_g4666_i0 PRJNA235310 4692 171 1.47541 2.5229511 Rhizophlyctis rosea 64517 Fungi Fungi 64.3 2.88e-10   NR KAJ3051582.1 64517 g4666 i0 57.1 2.94736842105263 56 24 98.2 0 170 3 201 256 KAJ3051582.1 Acyl-coenzyme A thioesterase 9, mitochondrial [Rhizophlyctis rosea] diamond 504 64.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
30408021 30408021 PRJNA235310_P_NODE_2353_length_252_cov_1.793103_g2327_i0 PRJNA235310 2353 252 1.793103 4.51861956 Eukaryota 2759 Fungi Fungi 80.5 8.09e-17   NR KAI9018381.1 82268 g2327 i0 48.8 4.83333333333333 80 41 95.2 0 250 11 22 101 KAI9018381.1 profilin [Hyaloraphidium curvatum] diamond 1218 80.9 0.995055624227441 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
30421914 30421914 PRJNA235310_P_NODE_3693_length_196_cov_1.768707_g3667_i0 PRJNA235310 3693 196 1.768707 3.46666572 Phlyctochytrium arcticum 1117335 Fungi Fungi 77.8 8.87e-15   NR KAI9104693.1 1117335 g3667 i0 51.5 1.04081632653061 68 30 99.5 1 196 2 233 300 KAI9104693.1 eukaryotic translation initiation factor eIF2A-domain-containing protein [Phlyctochytrium arcticum] diamond 204 77.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium arcticum
30755310 30755310 PRJNA235310_P_NODE_2574_length_240_cov_0.905759_g2548_i0 PRJNA235310 2574 240 0.905759 2.1738216 Eukaryota 2759 Fungi Fungi 102 1.86e-25   NR KAI9006100.1 109897 g2548 i0 65.2 6.9 69 24 86.3 0 3 209 1 69 KAI9006100.1 protein-tyrosine phosphatase [Gaertneriomyces semiglobifer] diamond 1656 103 0.990291262135922 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gaertneriomyces Gaertneriomyces semiglobifer
30832240 30832240 PRJNA235310_P_NODE_3354_length_207_cov_1.259494_g3328_i0 PRJNA235310 3354 207 1.259494 2.60715258 Quaeritorhiza haematococci 2654861 Fungi Fungi 94 9.95e-21   NR KAJ3079133.1 2654861 g3328 i0 61.8 2.95652173913043 68 26 98.6 0 3 206 253 320 KAJ3079133.1 Carboxypeptidase A4, partial [Quaeritorhiza haematococci] diamond 612 94 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
31306244 31306244 PRJNA235310_P_NODE_6175_length_163_cov_0.912281_g6149_i0 PRJNA235310 6175 163 0.912281 1.48701803 Gorgonomyces haynaldii 382530 Fungi Fungi 73.6 1.65e-13   NR KAI8916019.1 382530 g6149 i0 77.3 3.40490797546012 44 10 81 0 152 21 574 617 KAI8916019.1 ATP-dependent DNA ligase [Gorgonomyces haynaldii] diamond 555 73.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Gorgonomycetaceae Gorgonomyces Gorgonomyces haynaldii
32033896 32033896 PRJNA235310_P_NODE_4118_length_185_cov_1.713235_g4092_i0 PRJNA235310 4118 185 1.713235 3.16948475 Phlyctochytrium arcticum 1117335 Fungi Fungi 42 0.0326   NR KAI9101939.1 1117335 g4092 i0 40.4 0.924324324324324 57 31 90.8 2 168 1 158 212 KAI9101939.1 hypothetical protein DFS34DRAFT_437262 [Phlyctochytrium arcticum] diamond 171 42 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium arcticum
32494797 32494797 PRJNA235310_P_NODE_1599_length_318_cov_1.156134_g1573_i0 PRJNA235310 1599 318 1.156134 3.67650612 Fungi 4751 Fungi Fungi 119 1.71e-32   NR KAI9008584.1 82268 g1573 i0 59.6 26.1320754716981 94 38 88.7 0 7 288 13 106 KAI9008584.1 50S ribosomal protein L30e-like protein [Hyaloraphidium curvatum] diamond 8310 120 0.991666666666667 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
32715363 32715363 PRJNA235310_P_NODE_4480_length_176_cov_1.228346_g4454_i0 PRJNA235310 4480 176 1.228346 2.16188896 Fungi 4751 Fungi Fungi 106 2.97e-25   NR KAJ3211753.1 109932 g4454 i0 75.9 14.8295454545455 58 14 98.9 0 174 1 232 289 KAJ3211753.1 heme peroxidase [Entophlyctis luteolus] diamond 2610 107 0.990654205607477 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis luteolus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;