RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA235310" and tax_kingdom = "Bamfordvirae"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA235310 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15670138 15670138 PRJNA235310_P_NODE_2053_length_274_cov_1.413333_g2027_i0 PRJNA235310 2053 274 1.413333 3.87253242 Indivirus ILV1 1977633 Viruses Viruses 108 5.3e-19   NTclustered gi|1174570775|gb|KY684086.1| 1977633 g2027 i0 83.333 0.693430656934307 120 17 43 3 120 238 146633 146516 Indivirus ILV1 isolate ILV1 clone Indivirus_2, sequence blastn 190 108 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Indivirus Indivirus ILV1
29316073 29316073 PRJNA235310_P_NODE_6009_length_164_cov_0.904348_g5983_i0 PRJNA235310 6009 164 0.904348 1.48313072 Klosneuvirus KNV1 1977640 Viruses Viruses 73.2 2.2e-13   NR ARF12269.1 1977640 g5983 i0 58.5 0.969512195121951 53 22 97 0 163 5 246 298 ARF12269.1 ornithine decarboxylase [Klosneuvirus KNV1] diamond 159 73.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1
31274655 31274655 PRJNA235310_P_NODE_5895_length_164_cov_1.217391_g5869_i0 PRJNA235310 5895 164 1.217391 1.99652124 Gaeavirus sp. 2487767 Viruses Viruses 63.5 5.8e-10   NR AYV79987.1 2487767 g5869 i0 56.4 1.00609756097561 55 23 98.8 1 1 162 977 1031 AYV79987.1 MAG: mRNA capping enzyme [Gaeavirus sp.] diamond 165 63.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Gaeavirus sp.
32413661 32413661 PRJNA235310_P_NODE_1979_length_280_cov_2.952381_g1953_i0 PRJNA235310 1979 280 2.952381 8.2666668 Gaeavirus sp. 2487767 Viruses Viruses 65.9 7.8e-12   NR AYV80119.1 2487767 g1953 i0 46.5 0.760714285714286 71 35 76.1 1 7 219 4 71 AYV80119.1 MAG: hypothetical protein Gaeavirus10_15 [Gaeavirus sp.] diamond 213 65.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Gaeavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;