RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA235310", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA235310 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27611206 27611206 PRJNA235310_P_NODE_344_length_611_cov_1.576512_g321_i0 PRJNA235310 344 611 1.576512 9.63248832 Giardia intestinalis assemblage B 1394984 Fornicata other_Eukaryota 50.1 0.0013   NR KWX14910.1 1394984 g321 i0 40.2 0.810147299509002 87 38 42.7 4 134 394 96 168 KWX14910.1 Variant-specific surface protein [Giardia intestinalis assemblage B] diamond 495 50.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
27832052 27832052 PRJNA235310_P_NODE_4_length_2327_cov_4.452590_g3_i0 PRJNA235310 4 2327 4.45259 103.6117693 Kipferlia bialata 797122 Fornicata other_Eukaryota 52.4 0.0125   NR GIQ80334.1 797122 g3 i0 27.3 0.264288783841856 205 129 24.1 7 660 1220 719 921 GIQ80334.1 hypothetical protein KIPB_001114, partial [Kipferlia bialata] diamond 615 52.4 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;