RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA235310", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA235310 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28274007 28274007 PRJNA235310_P_NODE_1526_length_327_cov_1.169065_g1500_i0 PRJNA235310 1526 327 1.169065 3.82284255 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 130 1.2e-35   NR MBL8086383.1 2711154 g1500 i0 76.1 0.807339449541284 88 16 77.1 2 325 74 58 144 MBL8086383.1 ankyrin repeat domain-containing protein [Candidatus Obscuribacter sp.] diamond 264 130 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
31812404 31812404 PRJNA235310_P_NODE_6317_length_162_cov_0.920354_g6291_i0 PRJNA235310 6317 162 0.920354 1.49097348 Candidatus Melainabacteria bacterium RIFCSPLOWO2_12_FULL_35_11 1801609 Bacteria Bacteria 52.4 4.81e-6   NR OGI09100.1 1801609 g6291 i0 58.3 0.666666666666667 36 15 66.7 0 108 1 125 160 OGI09100.1 MAG: hypothetical protein A3F80_00030 [Candidatus Melainabacteria bacterium RIFCSPLOWO2_12_FULL_35_11] diamond 108 52.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium RIFCSPLOWO2_12_FULL_35_11
32083204 32083204 PRJNA235310_P_NODE_1458_length_335_cov_1.482517_g1432_i0 PRJNA235310 1458 335 1.482517 4.96643195 Bacillati 1783272 Bacteria Bacteria 125 3.8e-33   NR MBI3590799.1 2052166 g1432 i0 58.2 2.95522388059702 110 40 98.5 3 2 331 109 212 MBI3590799.1 SDR family oxidoreductase [Candidatus Melainabacteria bacterium] diamond 990 125 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;