RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA229468" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA229468 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15670093 15670093 PRJNA229468_S_NODE_713_length_195_cov_1.527397_g700_i0 PRJNA229468 713 195 1.527397 2.97842415 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 333 5.369999999999999e-87   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g700 i0 97.436 614.671794871795 195 5 100 0 1 195 5033557 5033751 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 119861 333 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
16944567 16944567 PRJNA229468_S_NODE_174_length_361_cov_1.634615_g161_i0 PRJNA229468 174 361 1.634615 5.90096015 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 592 1.6299999999999996e-164   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g161 i0 96.143 543.487534626039 363 12 100 2 1 361 5032293 5032655 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 196199 592 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
19493238 19493238 PRJNA229468_S_NODE_1016_length_169_cov_2.775000_g1003_i0 PRJNA229468 1016 169 2.775 4.68975 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 252 1.3e-62   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g1003 i0 93.529 700.585798816568 170 10 100 1 1 169 5031878 5032047 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 118399 252 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
22043870 22043870 PRJNA229468_S_NODE_598_length_209_cov_2.018750_g585_i0 PRJNA229468 598 209 2.01875 4.2191875 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 287 4.61e-73   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g585 i0 91.429 405.832535885167 210 16 100 2 1 209 5033288 5033496 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 84819 287 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
23319334 23319334 PRJNA229468_S_NODE_1139_length_165_cov_0.775862_g1126_i0 PRJNA229468 1139 165 0.775862 1.2801723 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 213 5.98e-51   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g1126 i0 91.139 386.018181818182 158 12 96 1 8 165 5032914 5033069 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 63693 213 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;