RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA229468", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA229468 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2917900 2917900 PRJNA229468_S_NODE_163_length_378_cov_1.683891_g150_i0 PRJNA229468 163 378 1.683891 6.36510798 Lottia gigantea 225164 Mollusca Mollusca 226 1.9999999999999998e-54   NTclustered gi|676456588|ref|XM_009056125.1| 225164 g150 i0 83.065 7.94708994708995 248 42 66 0 25 272 386 139 Lottia gigantea hypothetical protein mRNA blastn 3004 226 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
6744941 6744941 PRJNA229468_S_NODE_426_length_240_cov_1.198953_g413_i0 PRJNA229468 426 240 1.198953 2.8774872 Physella acuta 109671 Mollusca Mollusca 154 5.75e-33   NTclustered gi|2572306679|ref|XM_059294357.1| 109671 g413 i0 82.065 28.5208333333333 184 30 76 3 1 183 305 486 PREDICTED: Physella acuta large ribosomal subunit protein uL14 (LOC131937156), mRNA blastn 6845 154 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
10571341 10571341 PRJNA229468_S_NODE_749_length_190_cov_1.517730_g736_i0 PRJNA229468 749 190 1.51773 2.883687 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 105 5.28e-26   NR XP_052775540.1 6604 g736 i0 78 44.8578947368421 59 13 93.2 0 13 189 166 224 XP_052775540.1 peroxiredoxin-1-like [Mya arenaria] diamond 8523 105 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
14396334 14396334 PRJNA229468_S_NODE_1032_length_168_cov_1.285714_g1019_i0 PRJNA229468 1032 168 1.285714 2.15999952 Haliotis rubra 36100 Mollusca Mollusca 107 2.66e-26   NR XP_046577959.1 36100 g1019 i0 87.3 7.85714285714286 55 7 98.2 0 2 166 120 174 XP_046577959.1 LOW QUALITY PROTEIN: glyceraldehyde-3-phosphate dehydrogenase 2-like [Haliotis rubra] diamond 1320 107 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra
19493241 19493241 PRJNA229468_S_NODE_1156_length_164_cov_0.886957_g1143_i0 PRJNA229468 1156 164 0.886957 1.45460948 Saccostrea cuccullata 36930 Mollusca Mollusca 52.8 0.014   NTclustered gi|2669042795|ref|XM_062758970.1| 36930 g1143 i0 96.774 0.378048780487805 31 1 19 0 99 129 2414 2384 PREDICTED: Saccostrea cucullata MAM and LDL-receptor class A domain-containing protein 2-like (LOC134276709), mRNA blastn 62 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
27755398 27755398 PRJNA229468_S_NODE_704_length_196_cov_1.319728_g691_i0 PRJNA229468 704 196 1.319728 2.58666688 root 1 Root_unresolved Root_unresolved 49.3 9.89e-5   NR XP_053394748.1 6596 g691 i0 45.2 9.79591836734694 73 29 98 2 196 5 496 566 XP_053394748.1 sterol carrier protein 2-like isoform X4 [Mercenaria mercenaria] diamond 1920 49.7 0.991951710261569 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
28305690 28305690 PRJNA229468_S_NODE_1186_length_163_cov_0.894737_g1173_i0 PRJNA229468 1186 163 0.894737 1.45842131 Saccostrea echinata 191078 Mollusca Mollusca 44.7 0.0027   NR XP_061173563.1 191078 g1173 i0 58.3 2.3558282208589 36 15 66.3 0 7 114 522 557 XP_061173563.1 fibropellin-1-like [Saccostrea echinata] diamond 384 44.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea echinata
29744040 29744040 PRJNA229468_S_NODE_390_length_251_cov_1.405941_g377_i0 PRJNA229468 390 251 1.405941 3.52891191 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 121 1.02e-29   NR XP_070174385.1 31220 g377 i0 70 6.72908366533865 80 24 95.6 0 242 3 1336 1415 XP_070174385.1 multidrug resistance-associated protein 1-like [Littorina saxatilis] diamond 1689 121 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
31970534 31970534 PRJNA229468_S_NODE_1098_length_166_cov_0.871795_g1085_i0 PRJNA229468 1098 166 0.871795 1.4471797 Physella acuta 109671 Mollusca Mollusca 42.7 0.0119   NR XP_059150767.1 109671 g1085 i0 37.3 2.7289156626506 59 32 97.6 1 3 164 129 187 XP_059150767.1 S-crystallin SL11-like isoform X1 [Physella acuta] diamond 453 42.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;