RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA229468", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA229468 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13121080 13121080 PRJNA229468_S_NODE_451_length_234_cov_1.308108_g438_i0 PRJNA229468 451 234 1.308108 3.06097272 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 165 2.58e-36   NTclustered gi|2729103509|ref|XM_065214830.1| 499914 g438 i0 81.159 3.25641025641026 207 37 88 2 10 215 143 348 PREDICTED: Rhopilema esculentum large ribosomal subunit protein uL15-like (LOC135695664), mRNA blastn 762 165 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
15084139 15084139 PRJNA229468_S_NODE_232_length_322_cov_1.446886_g219_i0 PRJNA229468 232 322 1.446886 4.65897292 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 185 1.52e-56   NR XP_065063129.1 499914 g219 i0 74.8 7.97515527950311 107 27 99.7 0 2 322 120 226 XP_065063129.1 large ribosomal subunit protein uL30-like [Rhopilema esculentum] diamond 2568 185 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
28765398 28765398 PRJNA229468_S_NODE_687_length_197_cov_1.763514_g674_i0 PRJNA229468 687 197 1.763514 3.47412258 Actiniaria 6103 Cnidaria other_Eukaryota 86.3 5.76e-20   NR XP_031552790.1 6105 g674 i0 66.7 2.60406091370558 57 19 86.8 0 175 5 3 59 XP_031552790.1 60S ribosomal protein L35a-like [Actinia tenebrosa] diamond 513 86.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
29473673 29473673 PRJNA229468_S_NODE_670_length_200_cov_1.013245_g657_i0 PRJNA229468 670 200 1.013245 2.02649 Hydra vulgaris 6087 Cnidaria other_Eukaryota 47 6.7e-4   NR XP_047141988.1 6087 g657 i0 34.4 1.875 64 40 96 1 196 5 324 385 XP_047141988.1 uncharacterized protein sll0103 isoform X1 [Hydra vulgaris] diamond 375 47 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
29694643 29694643 PRJNA229468_S_NODE_610_length_207_cov_0.968354_g597_i0 PRJNA229468 610 207 0.968354 2.00449278 Actinostola sp. cb2 3060491 Cnidaria other_Eukaryota 56.2 4.05e-7   NR KAK3743620.1 3060491 g597 i0 46.3 0.971014492753623 67 35 97.1 1 205 5 709 774 KAK3743620.1 hypothetical protein QZH41_017696, partial [Actinostola sp. cb2023] diamond 201 56.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinostolidae Actinostola Actinostola sp. cb2023
31008053 31008053 PRJNA229468_S_NODE_414_length_244_cov_1.420513_g401_i0 PRJNA229468 414 244 1.420513 3.46605172 Metazoa 33208 Cnidaria other_Eukaryota 123 1.05e-33   NR XP_031572794.1 6105 g401 i0 78.2 18.3073770491803 78 17 95.9 0 9 242 22 99 XP_031572794.1 40S ribosomal protein S16-like [Actinia tenebrosa] diamond 4467 123 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
31861645 31861645 PRJNA229468_S_NODE_717_length_194_cov_1.758621_g704_i0 PRJNA229468 717 194 1.758621 3.41172474 root 1 Root_unresolved Root_unresolved 74.7 4.12e-15   NR KII62976.1 669202 g704 i0 54.1 2.65979381443299 61 28 94.3 0 183 1 12 72 KII62976.1 60S ribosomal protein L23 [Thelohanellus kitauei] diamond 516 74.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Thelohanellus Thelohanellus kitauei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;