RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA229468", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA229468 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27421864 27421864 PRJNA229468_S_NODE_1163_length_164_cov_0.886957_g1150_i0 PRJNA229468 1163 164 0.886957 1.45460948 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 41.6 0.0143   NR GKT36224.1 2918883 g1150 i0 41.2 1.75609756097561 51 26 93.3 1 158 6 61 107 GKT36224.1 ubiquitin-fusion protein [Aduncisulcus paluster] diamond 288 41.6 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
27926825 27926825 PRJNA229468_S_NODE_325_length_275_cov_2.030973_g312_i0 PRJNA229468 325 275 2.030973 5.58517575 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 144 8.13e-42   NR XP_067763597.1 348837 g312 i0 70.3 0.992727272727273 91 27 99.3 0 2 274 8 98 XP_067763597.1 Nucleoside diphosphate kinase [Spironucleus salmonicida] diamond 273 144 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
31242981 31242981 PRJNA229468_S_NODE_835_length_182_cov_1.533835_g822_i0 PRJNA229468 835 182 1.533835 2.7915797 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 100 7.93e-24   NR GKT34402.1 2918883 g822 i0 79.7 1.94505494505495 59 12 97.3 0 179 3 48 106 GKT34402.1 60S ribosomal protein L5 [Aduncisulcus paluster] diamond 354 100 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;