RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA222400" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA222400 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1056573 1056573 PRJNA222400_P_NODE_1621_length_401_cov_1.085227_g1588_i0 PRJNA222400 1621 401 1.085227 4.35176027 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 131 1.4399999999999999e-34   NR KAF4650205.1 330153 g1588 i0 51.6 1.83291770573566 124 56 92.8 1 2 373 59 178 KAF4650205.1 hypothetical protein FOL47_001370 [Perkinsus chesapeaki] diamond 735 131 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
14396242 14396242 PRJNA222400_P_NODE_2852_length_281_cov_1.392241_g2819_i0 PRJNA222400 2852 281 1.392241 3.91219721 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 124 9.11e-31   NR KAF4690990.1 32597 g2819 i0 68.1 14.9466192170819 94 28 99.3 2 3 281 62 154 KAF4690990.1 V-type proton ATPase catalytic subunit A [Perkinsus olseni] diamond 4200 125 0.992 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
16944472 16944472 PRJNA222400_P_NODE_3014_length_272_cov_1.609865_g2981_i0 PRJNA222400 3014 272 1.609865 4.3788328 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 136 6.81e-39   NR KAF4646471.1 32597 g2981 i0 74.4 17.8676470588235 90 23 99.3 0 272 3 18 107 KAF4646471.1 hypothetical protein FOZ61_005816, partial [Perkinsus olseni] diamond 4860 137 0.992700729927007 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
17634129 17634129 PRJNA222400_P_NODE_1734_length_387_cov_1.076923_g1701_i0 PRJNA222400 1734 387 1.076923 4.16769201 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 159 2.7799999999999992e-43   NR KAF4695297.1 32597 g1701 i0 59.4 3.96899224806202 128 52 99.2 0 386 3 364 491 KAF4695297.1 hypothetical protein FOZ60_005162 [Perkinsus olseni] diamond 1536 159 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
20768739 20768739 PRJNA222400_P_NODE_5377_length_193_cov_1.263889_g5344_i0 PRJNA222400 5377 193 1.263889 2.43930577 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 128 2.69e-25   NTclustered gi|294891205|ref|XM_002773427.1| 423536 g5344 i0 84.091 2.73575129533679 132 21 68 0 21 152 231 100 Perkinsus marinus ATCC 50983 40S ribosomal protein S11, putative, mRNA blastn 528 128 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
26806973 26806973 PRJNA222400_P_NODE_6901_length_171_cov_1.704918_g6868_i0 PRJNA222400 6901 171 1.704918 2.91540978 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 95.1 1.18e-21   NR KAF4667652.1 32597 g6868 i0 76.9 4.70175438596491 52 12 91.2 0 14 169 155 206 KAF4667652.1 hypothetical protein FOZ61_008040 [Perkinsus olseni] diamond 804 95.9 0.991657977059437 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
29473668 29473668 PRJNA222400_P_NODE_4830_length_202_cov_2.150327_g4797_i0 PRJNA222400 4830 202 2.150327 4.34366054 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 113 2.03e-28   NR XP_002774056.1 423536 g4797 i0 82.1 0.995049504950495 67 12 99.5 0 201 1 218 284 XP_002774056.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983] diamond 201 113 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
30358837 30358837 PRJNA222400_P_NODE_5732_length_187_cov_1.862319_g5699_i0 PRJNA222400 5732 187 1.862319 3.48253653 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 74.7 9.21e-14   NR KAF4669068.1 330153 g5699 i0 65.6 1.94117647058824 61 21 97.9 0 3 185 1412 1472 KAF4669068.1 hypothetical protein FOL47_002718 [Perkinsus chesapeaki] diamond 363 74.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
32855003 32855003 PRJNA222400_P_NODE_1300_length_455_cov_1.756158_g1267_i0 PRJNA222400 1300 455 1.756158 7.9905189 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 205 2.16e-64   NR XP_002778466.1 423536 g1267 i0 64.2 0.995604395604396 151 53 98.9 1 1 450 35 185 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 453 205 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;