RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA222400" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA222400 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28084584 28084584 PRJNA222400_P_NODE_6385_length_177_cov_2.031250_g6352_i0 PRJNA222400 6385 177 2.03125 3.5953125 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 47.8 2.63e-4   NR MFH1046421.1 2035772 g6352 i0 44.9 0.830508474576271 49 27 83.1 0 149 3 1934 1982 MFH1046421.1 LamG-like jellyroll fold domain-containing protein [Candidatus Omnitrophota bacterium] diamond 147 47.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28716254 28716254 PRJNA222400_P_NODE_7407_length_168_cov_1.302521_g7374_i0 PRJNA222400 7407 168 1.302521 2.18823528 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 59.3 1.13e-8   NR MCD4781063.1 2035772 g7374 i0 57.4 1.67857142857143 47 17 83.9 1 145 5 172 215 MCD4781063.1 SDR family oxidoreductase [Candidatus Omnitrophota bacterium] diamond 282 59.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29410681 29410681 PRJNA222400_P_NODE_6649_length_174_cov_1.560000_g6616_i0 PRJNA222400 6649 174 1.56 2.7144 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 65.9 8.19e-11   NR HTY13832.1 2035772 g6616 i0 60 1.58620689655172 45 18 77.6 0 161 27 71 115 HTY13832.1 6-bladed beta-propeller [Candidatus Omnitrophota bacterium] diamond 276 65.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;