RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA222400" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA222400 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29775734 29775734 PRJNA222400_P_NODE_7331_length_169_cov_0.866667_g7298_i0 PRJNA222400 7331 169 0.866667 1.46466723 Bacteria 2 Bacteria Bacteria 87.4 2.39e-18   NR MDY6916011.1 2030808 g7298 i0 69.1 20.6272189349112 55 17 97.6 0 167 3 87 141 MDY6916011.1 glutamine synthetase III [Candidatus Cloacimonadota bacterium] diamond 3486 88.2 0.99092970521542 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32823638 32823638 PRJNA222400_P_NODE_8820_length_164_cov_0.904348_g8787_i0 PRJNA222400 8820 164 0.904348 1.48313072 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 76.3 1.93e-14   NR MBC8416206.1 2030808 g8787 i0 61.1 1.97560975609756 54 21 98.8 0 162 1 460 513 MBC8416206.1 NAD-dependent malic enzyme [Candidatus Cloacimonadota bacterium] diamond 324 76.3 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;