contig_metadata
8 rows where bioproject = "PRJNA222400", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1056587 | 1056587 | PRJNA222400_P_NODE_6921_length_171_cov_1.311475_g6888_i0 | PRJNA222400 | 6921 | 171 | 1.311475 | 2.24262225 | Bdellovibrio | 958 | Bacteria | Bacteria | 272 | 1.01e-68 | NTclustered | gi|1210342126|gb|CP020946.1| | 959 | g6888 | i0 | 95.322 | 123.397660818713 | 171 | 8 | 100 | 0 | 1 | 171 | 2952219 | 2952049 | Bdellovibrio bacteriovorus strain SSB218315, complete genome | blastn | 21101 | 272 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 8020617 | 8020617 | PRJNA222400_P_NODE_5467_length_191_cov_2.035211_g5434_i0 | PRJNA222400 | 5467 | 191 | 2.035211 | 3.88725301 | Bacteria | 2 | Bacteria | Bacteria | 104 | 2.77e-24 | NR | MCB0326570.1 | 2053517 | g5434 | i0 | 74.2 | 1.94764397905759 | 62 | 16 | 97.4 | 0 | 188 | 3 | 668 | 729 | MCB0326570.1 ribonucleoside-diphosphate reductase subunit alpha [Bdellovibrionales bacterium] | diamond | 372 | 104 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 18218885 | 18218885 | PRJNA222400_P_NODE_5855_length_186_cov_0.912409_g5822_i0 | PRJNA222400 | 5855 | 186 | 0.912409 | 1.69708074 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 267 | 5.22e-67 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g5822 | i0 | 92.473 | 295.467741935484 | 186 | 14 | 100 | 0 | 1 | 186 | 668330 | 668145 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 54957 | 267 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 19493162 | 19493162 | PRJNA222400_P_NODE_3436_length_247_cov_1.196970_g3403_i0 | PRJNA222400 | 3436 | 247 | 1.19697 | 2.9565159 | Bdellovibrio sp. NC | 28201 | Bacteria | Bacteria | 99.8 | 1.36e-22 | NR | WP_142694956.1 | 2220073 | g3403 | i0 | 61 | 7.87044534412955 | 82 | 32 | 99.6 | 0 | 2 | 247 | 256 | 337 | WP_142694956.1 acetyl-CoA C-acetyltransferase [Bdellovibrio sp. NC01] | diamond | 1944 | 99.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 | ||
| 27881389 | 27881389 | PRJNA222400_P_NODE_7525_length_168_cov_0.873950_g7492_i0 | PRJNA222400 | 7525 | 168 | 0.87395 | 1.468236 | Bdellovibrio | 958 | Bacteria | Bacteria | 73.6 | 1.41e-13 | NR | OYZ13486.1 | 1970323 | g7492 | i0 | 69.1 | 2.05357142857143 | 55 | 16 | 98.2 | 1 | 167 | 3 | 300 | 353 | OYZ13486.1 MAG: hypothetical protein B7Y39_17575 [Bdellovibrio sp. 28-41-41] | diamond | 345 | 73.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. 28-41-41 | ||
| 28228488 | 28228488 | PRJNA222400_P_NODE_4846_length_202_cov_1.359477_g4813_i0 | PRJNA222400 | 4846 | 202 | 1.359477 | 2.74614354 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 49.7 | 6.7e-5 | NR | MBC7421275.1 | 28201 | g4813 | i0 | 48 | 3.47524752475248 | 50 | 26 | 74.3 | 0 | 194 | 45 | 140 | 189 | MBC7421275.1 MOSC domain-containing protein [Bdellovibrio sp.] | diamond | 702 | 49.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 29916210 | 29916210 | PRJNA222400_P_NODE_531_length_700_cov_3.482335_g501_i0 | PRJNA222400 | 531 | 700 | 3.482335 | 24.376345 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 105 | 7.509999999999999e-24 | NR | MBT6325281.1 | 2053517 | g501 | i0 | 32.5 | 2.58857142857143 | 200 | 128 | 82.7 | 4 | 656 | 78 | 10 | 209 | MBT6325281.1 glutathione S-transferase [Bdellovibrionales bacterium] | diamond | 1812 | 105 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32318927 | 32318927 | PRJNA222400_P_NODE_1719_length_388_cov_1.392330_g1686_i0 | PRJNA222400 | 1719 | 388 | 1.39233 | 5.4022404 | Bdellovibrionales bacterium RIFOXYD1_FULL_44_7 | 1797402 | Bacteria | Bacteria | 47.8 | 0.0021 | NR | OFZ79669.1 | 1797402 | g1686 | i0 | 36 | 1.35309278350515 | 89 | 45 | 68.8 | 3 | 18 | 284 | 151 | 227 | OFZ79669.1 MAG: hypothetical protein A3K03_06035 [Bdellovibrionales bacterium RIFOXYD1_FULL_44_7] | diamond | 525 | 47.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium RIFOXYD1_FULL_44_7 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;