contig_metadata
26 rows where bioproject = "PRJNA222400", tax_phylum = "Bacillota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2331796 | 2331796 | PRJNA222400_P_NODE_2122_length_343_cov_1.408163_g2089_i0 | PRJNA222400 | 2122 | 343 | 1.408163 | 4.82999909 | Streptococcus | 1301 | Bacteria | Bacteria | 601 | 2.57e-167 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g2089 | i0 | 99.396 | 323.081632653061 | 331 | 2 | 97 | 0 | 1 | 331 | 1570737 | 1570407 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 110817 | 606 | 0.991749174917492 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 3607025 | 3607025 | PRJNA222400_P_NODE_5183_length_196_cov_1.544218_g5150_i0 | PRJNA222400 | 5183 | 196 | 1.544218 | 3.02666728 | Bacillus | 1386 | Bacteria | Bacteria | 243 | 9.37e-60 | NTclustered | gi|2509182168|gb|CP106987.1| | 1396 | g5150 | i0 | 97.872 | 850.178571428571 | 141 | 2 | 71 | 1 | 57 | 196 | 1138027 | 1137887 | Bacillus cereus strain IBA1 chromosome, complete genome | blastn | 166635 | 243 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 8709219 | 8709219 | PRJNA222400_P_NODE_1687_length_392_cov_1.253644_g1654_i0 | PRJNA222400 | 1687 | 392 | 1.253644 | 4.91428448 | Priestia | 2800373 | Bacteria | Bacteria | 54.7 | 0.01 | NTclustered | gi|2780461943|gb|CP162497.1| | 1404 | g1654 | i0 | 100 | 0.311224489795918 | 29 | 0 | 7 | 0 | 153 | 181 | 2411835 | 2411807 | Priestia megaterium strain 10 chromosome, complete genome | blastn | 122 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Priestia | Priestia megaterium | ||
| 8709230 | 8709230 | PRJNA222400_P_NODE_3567_length_239_cov_3.505263_g3534_i0 | PRJNA222400 | 3567 | 239 | 3.505263 | 8.37757857 | Streptococcus | 1301 | Bacteria | Bacteria | 442 | 1.0899999999999994e-119 | NTclustered | gi|2179899321|gb|CP046523.1| | 1303 | g3534 | i0 | 100 | 318 | 239 | 0 | 100 | 0 | 1 | 239 | 18365 | 18127 | Streptococcus oralis strain SOD chromosome, complete genome | blastn | 76002 | 442 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 9295295 | 9295295 | PRJNA222400_P_NODE_6008_length_183_cov_1.552239_g5975_i0 | PRJNA222400 | 6008 | 183 | 1.552239 | 2.84059737 | Secundilactobacillus paracollinoides | 240427 | Bacteria | Bacteria | 80.5 | 7.15e-11 | NTclustered | gi|1050781558|gb|CP014915.1| | 240427 | g5975 | i0 | 76.074 | 14.5956284153005 | 163 | 33 | 87 | 6 | 12 | 171 | 970733 | 970574 | Secundilactobacillus paracollinoides strain TMW 1.1994 chromosome, complete genome | blastn | 2671 | 80.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Secundilactobacillus | Secundilactobacillus paracollinoides | ||
| 9295311 | 9295311 | PRJNA222400_P_NODE_6988_length_170_cov_1.636364_g6955_i0 | PRJNA222400 | 6988 | 170 | 1.636364 | 2.7818188 | Dysosmobacter sp. Marseille-Q4140 | 2830675 | Bacteria | Bacteria | 75 | 3.03e-9 | NTclustered | gi|2031400201|gb|CP073694.1| | 2830675 | g6955 | i0 | 92.453 | 0.311764705882353 | 53 | 2 | 31 | 2 | 51 | 102 | 2353692 | 2353743 | Dysosmobacter sp. Marseille-Q4140 chromosome | blastn | 53 | 75 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Dysosmobacter | Dysosmobacter sp. Marseille-Q4140 | ||
| 9295312 | 9295312 | PRJNA222400_P_NODE_7128_length_169_cov_1.300000_g7095_i0 | PRJNA222400 | 7128 | 169 | 1.3 | 2.197 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 311 | 2.11e-80 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g7095 | i0 | 100 | 490.544378698225 | 168 | 0 | 99 | 0 | 1 | 168 | 3359 | 3526 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 82902 | 311 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 16358943 | 16358943 | PRJNA222400_P_NODE_7633_length_167_cov_1.677966_g7600_i0 | PRJNA222400 | 7633 | 167 | 1.677966 | 2.80220322 | Bacteria | 2 | Bacteria | Bacteria | 217 | 4.69e-52 | NTclustered | gi|1147724948|gb|KY622910.1| | 1290 | g7600 | i0 | 99.174 | 103.245508982036 | 121 | 0 | 100 | 1 | 48 | 167 | 246 | 126 | Staphylococcus hominis strain OA313 16S ribosomal RNA gene, partial sequence | blastn | 17242 | 219 | 0.990867579908676 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 18218874 | 18218874 | PRJNA222400_P_NODE_495_length_725_cov_3.152367_g466_i0 | PRJNA222400 | 495 | 725 | 3.152367 | 22.85466075 | Bacillus mycoides | 1405 | Bacteria | Bacteria | 60.2 | 4.34e-4 | NTclustered | gi|2049754127|gb|CP036116.1| | 1405 | g466 | i0 | 100 | 0.437241379310345 | 32 | 0 | 4 | 0 | 578 | 609 | 74362 | 74393 | Bacillus mycoides strain JAS481 plasmid p124 | blastn | 317 | 60.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus mycoides | ||
| 18218917 | 18218917 | PRJNA222400_P_NODE_8635_length_164_cov_1.304348_g8602_i0 | PRJNA222400 | 8635 | 164 | 1.304348 | 2.13913072 | Ezakiella coagulans | 46507 | Bacteria | Bacteria | 303 | 3.42e-78 | NTclustered | gi|2238283248|gb|CP096650.1| | 46507 | g8602 | i0 | 100 | 294.865853658537 | 164 | 0 | 100 | 0 | 1 | 164 | 160660 | 160497 | Ezakiella coagulans strain C0061C1 chromosome, complete genome | blastn | 48358 | 303 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Ezakiella | Ezakiella coagulans | ||||
| 18218924 | 18218924 | PRJNA222400_P_NODE_9535_length_156_cov_2.261682_g9502_i0 | PRJNA222400 | 9535 | 156 | 2.261682 | 3.52822392 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 289 | 9e-74 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g9502 | i0 | 100 | 560.019230769231 | 156 | 0 | 100 | 0 | 1 | 156 | 3002 | 2847 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 87363 | 289 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 27597416 | 27597416 | PRJNA222400_P_NODE_8084_length_166_cov_0.888889_g8051_i0 | PRJNA222400 | 8084 | 166 | 0.888889 | 1.47555574 | PVC group | 1783257 | Bacteria | Bacteria | 63.2 | 7.02e-10 | NR | WP_129077981.1 | 1548597 | g8051 | i0 | 50.9 | 3.90361445783133 | 55 | 27 | 99.4 | 0 | 165 | 1 | 73 | 127 | WP_129077981.1 6-bladed beta-propeller [Anaerobacillus alkaliphilus] | diamond | 648 | 63.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Anaerobacillus | Anaerobacillus alkaliphilus | ||
| 27944634 | 27944634 | PRJNA222400_P_NODE_525_length_707_cov_1.655015_g496_i0 | PRJNA222400 | 525 | 707 | 1.655015 | 11.70095605 | Bacillati | 1783272 | Bacteria | Bacteria | 163 | 1.3e-44 | NR | WP_188647295.1 | 1571185 | g496 | i0 | 46 | 21.5516265912306 | 189 | 78 | 80.2 | 4 | 29 | 595 | 199 | 363 | WP_188647295.1 4-hydroxyphenylpyruvate dioxygenase [Marinithermofilum abyssi] | diamond | 15237 | 164 | 0.99390243902439 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Thermoactinomycetaceae | Marinithermofilum | Marinithermofilum abyssi | ||
| 28291726 | 28291726 | PRJNA222400_P_NODE_4406_length_211_cov_1.925926_g4373_i0 | PRJNA222400 | 4406 | 211 | 1.925926 | 4.06370386 | Bacillales | 1385 | Bacteria | Bacteria | 95.9 | 1.36e-23 | NR | WP_056469398.1 | 1712029 | g4373 | i0 | 64.8 | 8.70142180094787 | 71 | 24 | 99.5 | 1 | 2 | 211 | 1 | 71 | WP_056469398.1 group I truncated hemoglobin [Bacillus sp. FJAT-25509] | diamond | 1836 | 96.3 | 0.995846313603323 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus sp. FJAT-25509 | ||
| 28653045 | 28653045 | PRJNA222400_P_NODE_1967_length_360_cov_2.758842_g1934_i0 | PRJNA222400 | 1967 | 360 | 2.758842 | 9.9318312 | Blautia sp. MSK.2 | 1955243 | Bacteria | Bacteria | 43.1 | 0.0213 | NR | WP_174088999.1 | 2709718 | g1934 | i0 | 33.7 | 0.766666666666667 | 92 | 59 | 75.8 | 2 | 84 | 356 | 11 | 101 | WP_174088999.1 prealbumin-like fold domain-containing protein, partial [Blautia sp. MSK.20.85] | diamond | 276 | 43.1 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Blautia | Blautia sp. MSK.20.85 | ||
| 28905358 | 28905358 | PRJNA222400_P_NODE_2668_length_294_cov_2.000000_g2635_i0 | PRJNA222400 | 2668 | 294 | 2 | 5.88 | Bacillus weihaiensis | 1547283 | Bacteria | Bacteria | 108 | 1.25e-26 | NR | WP_083584509.1 | 1547283 | g2635 | i0 | 55.7 | 2.95918367346939 | 97 | 43 | 99 | 0 | 3 | 293 | 27 | 123 | WP_083584509.1 nucleoside phosphorylase [Bacillus weihaiensis] | diamond | 870 | 108 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus weihaiensis | ||
| 28937285 | 28937285 | PRJNA222400_P_NODE_5908_length_185_cov_1.088235_g5875_i0 | PRJNA222400 | 5908 | 185 | 1.088235 | 2.01323475 | Niameybacter massiliensis | 1658108 | Bacteria | Bacteria | 56.2 | 2.97e-7 | NR | WP_053984370.1 | 1658108 | g5875 | i0 | 51.9 | 4.32972972972973 | 52 | 25 | 84.3 | 0 | 158 | 3 | 329 | 380 | WP_053984370.1 ABC transporter ATP-binding protein [Niameybacter massiliensis] | diamond | 801 | 56.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Niameybacter | Niameybacter massiliensis | ||
| 29221541 | 29221541 | PRJNA222400_P_NODE_1929_length_364_cov_1.679365_g1896_i0 | PRJNA222400 | 1929 | 364 | 1.679365 | 6.1128886 | Priestia megaterium | 1404 | Bacteria | Bacteria | 99.8 | 5.31e-23 | NR | WP_114896361.1 | 1404 | g1896 | i0 | 44.7 | 0.93956043956044 | 114 | 59 | 94 | 2 | 19 | 360 | 2 | 111 | WP_114896361.1 SDR family oxidoreductase [Priestia megaterium] | diamond | 342 | 99.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Priestia | Priestia megaterium | ||
| 29333852 | 29333852 | PRJNA222400_P_NODE_1089_length_495_cov_1.405830_g1056_i0 | PRJNA222400 | 1089 | 495 | 1.40583 | 6.9588585 | root | 1 | Root_unresolved | Root_unresolved | 88.2 | 8.37e-20 | NR | WP_369599335.1 | 1590 | g1056 | i0 | 90.7 | 51.8606060606061 | 43 | 4 | 26.1 | 0 | 495 | 367 | 17 | 59 | WP_369599335.1 hypothetical protein, partial [Lactiplantibacillus plantarum] | diamond | 25671 | 89 | 0.991011235955056 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus plantarum | ||
| 29933957 | 29933957 | PRJNA222400_P_NODE_1691_length_391_cov_1.666667_g1658_i0 | PRJNA222400 | 1691 | 391 | 1.666667 | 6.51666797 | PVC group | 1783257 | Bacteria | Bacteria | 62.4 | 2.65e-8 | NR | MBR5302381.1 | 2044939 | g1658 | i0 | 46.6 | 4.12020460358056 | 73 | 34 | 53.7 | 2 | 68 | 277 | 363 | 433 | MBR5302381.1 cation-translocating P-type ATPase [Clostridia bacterium] | diamond | 1611 | 62.8 | 0.993630573248408 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 30249960 | 30249960 | PRJNA222400_P_NODE_2932_length_276_cov_1.647577_g2899_i0 | PRJNA222400 | 2932 | 276 | 1.647577 | 4.54731252 | PVC group | 1783257 | Bacteria | Bacteria | 51.2 | 2.66e-5 | NR | WP_126810078.1 | 180344 | g2899 | i0 | 41.8 | 13.5760869565217 | 79 | 43 | 82.6 | 1 | 6 | 233 | 105 | 183 | WP_126810078.1 ribosome recycling factor [Vagococcus elongatus] | diamond | 3747 | 51.6 | 0.992248062015504 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Vagococcus | Vagococcus elongatus | ||
| 30390363 | 30390363 | PRJNA222400_P_NODE_1153_length_479_cov_2.290698_g1120_i0 | PRJNA222400 | 1153 | 479 | 2.290698 | 10.97244342 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 54.3 | 3.5e-5 | NR | MBQ8739326.1 | 2044939 | g1120 | i0 | 48.8 | 0.782881002087683 | 43 | 22 | 26.9 | 0 | 17 | 145 | 156 | 198 | MBQ8739326.1 hypothetical protein [Clostridia bacterium] | diamond | 375 | 54.3 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 30800570 | 30800570 | PRJNA222400_P_NODE_674_length_633_cov_2.642123_g644_i0 | PRJNA222400 | 674 | 633 | 2.6421230000000002 | 16.72463859 | Pontibacillus sp. HMF3514 | 2692425 | Bacteria | Bacteria | 147 | 2.35e-41 | NR | WP_160098424.1 | 2692425 | g644 | i0 | 47.9 | 1.96208530805687 | 140 | 73 | 66.4 | 0 | 502 | 83 | 5 | 144 | WP_160098424.1 OsmC family protein [Pontibacillus sp. HMF3514] | diamond | 1242 | 147 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Pontibacillus | Pontibacillus sp. HMF3514 | ||
| 30895620 | 30895620 | PRJNA222400_P_NODE_6374_length_178_cov_0.953488_g6341_i0 | PRJNA222400 | 6374 | 178 | 0.953488 | 1.69720864 | Erysipelotrichaceae bacterium | 2049044 | Bacteria | Bacteria | 46.6 | 6.81e-4 | NR | MBR2801936.1 | 2049044 | g6341 | i0 | 41.2 | 0.859550561797753 | 51 | 30 | 86 | 0 | 2 | 154 | 333 | 383 | MBR2801936.1 glucosyltransferase [Erysipelotrichaceae bacterium] | diamond | 153 | 46.6 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Erysipelotrichaceae bacterium | |||
| 31292367 | 31292367 | PRJNA222400_P_NODE_7695_length_167_cov_1.169492_g7662_i0 | PRJNA222400 | 7695 | 167 | 1.169492 | 1.95305164 | PVC group | 1783257 | Bacteria | Bacteria | 111 | 3.3e-27 | NR | WP_093227905.1 | 46223 | g7662 | i0 | 92.7 | 78.0538922155689 | 55 | 4 | 98.8 | 0 | 3 | 167 | 99 | 153 | WP_093227905.1 NADP-dependent isocitrate dehydrogenase [Thermoflavimicrobium dichotomicum] | diamond | 13035 | 112 | 0.991071428571429 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Thermoactinomycetaceae | Thermoflavimicrobium | Thermoflavimicrobium dichotomicum | ||
| 32904203 | 32904203 | PRJNA222400_P_NODE_2440_length_315_cov_1.139098_g2407_i0 | PRJNA222400 | 2440 | 315 | 1.139098 | 3.5881587 | Bacteria | 2 | Bacteria | Bacteria | 136 | 1.85e-35 | NR | WP_322158004.1 | 1406 | g2407 | i0 | 56.9 | 8.72380952380952 | 116 | 39 | 100 | 2 | 1 | 315 | 38 | 153 | WP_322158004.1 GH39 family glycosyl hydrolase [Paenibacillus polymyxa] | diamond | 2748 | 136 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus polymyxa |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;