RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA222400" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA222400 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26965136 26965136 PRJNA222400_P_NODE_8602_length_164_cov_1.356522_g8569_i0 PRJNA222400 8602 164 1.356522 2.22469608 Thermofilum 2268 Archaea Archaea 57.4 3.04e-8   NR MEM0087650.1 1961369 g8569 i0 54.4 5.1219512195122 57 23 98.8 1 1 162 87 143 MEM0087650.1 ADP-ribose-binding protein [Thermofilum sp.] diamond 840 57.8 0.993079584775087 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermofilales Thermofilaceae Thermofilum Thermofilum sp.
29537058 29537058 PRJNA222400_P_NODE_6390_length_177_cov_1.796875_g6357_i0 PRJNA222400 6390 177 1.796875 3.18046875 Nitrosopumilus sp. 2024843 Archaea Archaea 45.4 0.00177   NR MBA4717734.1 2024843 g6357 i0 57.6 0.559322033898305 33 14 55.9 0 138 40 42 74 MBA4717734.1 SBBP repeat-containing protein [Nitrosopumilus sp.] diamond 99 45.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;