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contig_metadata

7 rows where bioproject = "PRJNA222400", tax_kingdom = "Methanobacteriati" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 7 ✖

tax_kingdom 1

  • Methanobacteriati · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA222400 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13809946 13809946 PRJNA222400_P_NODE_2271_length_328_cov_2.143369_g2238_i0 PRJNA222400 2271 328 2.143369 7.03025032 Haloquadratum 293431 Archaea Archaea 60.2 1.84e-4   NTclustered gi|109624723|emb|AM180088.1| 362976 g2238 i0 97.143 0.414634146341463 35 1 11 0 217 251 416558 416524 Haloquadratum walsbyi DSM 16790 complete genome blastn 136 60.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloquadratum Haloquadratum walsbyi
13809951 13809951 PRJNA222400_P_NODE_5591_length_190_cov_0.879433_g5558_i0 PRJNA222400 5591 190 0.879433 1.6709227 root 1 Root_unresolved Root_unresolved 69.4 1.62e-7   NTclustered gi|409168338|gb|CP003083.1| 1094980 g5558 i0 93.617 3.37894736842105 47 1 26 2 31 77 237478 237434 Methanolobus psychrophilus R15 chromosome, complete genome blastn 642 69.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus psychrophilus
27281520 27281520 PRJNA222400_P_NODE_3663_length_236_cov_1.042781_g3630_i0 PRJNA222400 3663 236 1.042781 2.46096316 root 1 Root_unresolved Root_unresolved 57.8 1.74e-7   NR MAS63026.1 2026739 g3630 i0 36.8 3.96610169491525 68 39 86.4 1 208 5 557 620 MAS63026.1 hypothetical protein [Methanobacteriota archaeon] diamond 936 57.8 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28481361 28481361 PRJNA222400_P_NODE_2886_length_279_cov_1.356522_g2853_i0 PRJNA222400 2886 279 1.356522 3.78469638 root 1 Root_unresolved Root_unresolved 62.4 5.09e-9   NR WP_117594871.1 2283527 g2853 i0 49.2 3.43010752688172 61 30 64.5 1 27 206 238 298 WP_117594871.1 alpha/beta fold hydrolase [Haloprofundus halophilus] diamond 957 62.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloprofundus Haloprofundus halophilus
31071347 31071347 PRJNA222400_P_NODE_5235_length_195_cov_1.547945_g5202_i0 PRJNA222400 5235 195 1.547945 3.01849275 Methanoregula 395331 Archaea Archaea 107 3.1e-25   NR WP_325410687.1 2052170 g5202 i0 75.8 30.8461538461538 62 15 95.4 0 2 187 503 564 WP_325410687.1 AMP-binding protein [Methanoregula sp.] diamond 6015 107 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
31812394 31812394 PRJNA222400_P_NODE_5537_length_190_cov_1.475177_g5504_i0 PRJNA222400 5537 190 1.475177 2.8028363 Methanobacteriota archaeon 2026739 Archaea Archaea 53.1 3.06e-7   NR MBE28306.1 2026739 g5504 i0 43.5 0.978947368421053 62 32 94.7 2 188 9 19 79 MBE28306.1 hypothetical protein [Methanobacteriota archaeon] diamond 186 53.1 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32255722 32255722 PRJNA222400_P_NODE_2998_length_273_cov_0.928571_g2965_i0 PRJNA222400 2998 273 0.928571 2.53499883 Halorussus 1070314 Archaea Archaea 77.8 8.22e-16   NR WP_253514529.1 1070314 g2965 i0 61.1 1.17582417582418 54 21 59.3 0 107 268 15 68 WP_253514529.1 MULTISPECIES: thiol-disulfide oxidoreductase DCC family protein [Halorussus] diamond 321 77.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;