RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA222400", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 5 ✖

tax_kingdom 1

  • Fungi · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA222400 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19493160 19493160 PRJNA222400_P_NODE_3336_length_252_cov_2.320197_g3303_i0 PRJNA222400 3336 252 2.320197 5.84689644 Rozella allomycis CSF55 988480 Fungi Fungi 81.6 1.65e-16   NR EPZ34692.1 988480 g3303 i0 59.5 2.5 79 28 92.9 2 252 19 179 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 630 81.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27990061 27990061 PRJNA222400_P_NODE_345_length_837_cov_2.187817_g321_i0 PRJNA222400 345 837 2.187817 18.31202829 Rozella allomycis CSF55 988480 Fungi Fungi 110 4.179999999999999e-23   NR EPZ32871.1 988480 g321 i0 45 0.390681003584229 109 58 38.7 2 827 504 1083 1190 EPZ32871.1 P-type ATPase domain-containing protein [Rozella allomycis CSF55] diamond 327 110 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29095178 29095178 PRJNA222400_P_NODE_3888_length_226_cov_2.045198_g3855_i0 PRJNA222400 3888 226 2.045198 4.62214748 Rozella allomycis CSF55 988480 Fungi Fungi 124 1.33e-33   NR EPZ30856.1 988480 g3855 i0 70.7 6.88938053097345 75 22 99.6 0 226 2 94 168 EPZ30856.1 Proteasome subunit beta type-6 [Rozella allomycis CSF55] diamond 1557 124 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29631530 29631530 PRJNA222400_P_NODE_4290_length_214_cov_1.715152_g4257_i0 PRJNA222400 4290 214 1.715152 3.67042528 Rozella allomycis CSF55 988480 Fungi Fungi 62.8 1.01e-9   NR EPZ31695.1 988480 g4257 i0 39.5 1.06542056074766 76 41 99.5 2 1 213 52 127 EPZ31695.1 Nucleotide-binding, alpha-beta plait domain-containing protein [Rozella allomycis CSF55] diamond 228 62.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32336600 32336600 PRJNA222400_P_NODE_6639_length_174_cov_1.664000_g6606_i0 PRJNA222400 6639 174 1.664 2.89536 Eukaryota 2759 Fungi Fungi 72.8 3.57e-13   NR EPZ31343.1 988480 g6606 i0 56.1 2.96551724137931 57 25 98.3 0 172 2 264 320 EPZ31343.1 DUF1900 domain-containing protein [Rozella allomycis CSF55] diamond 516 72.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;