RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA222400", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA222400 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1641978 1641978 PRJNA222400_P_NODE_2642_length_297_cov_1.258065_g2609_i0 PRJNA222400 2642 297 1.258065 3.73645305 Proleptomonas faecicola 149084 SAR_Eukaryotes SAR_Eukaryotes 294 4.15e-75   NTclustered gi|302026150|gb|GQ377654.1| 149084 g2609 i0 85.663 94.4646464646465 279 40 94 0 18 296 910 1188 Proleptomonas faecicola beta-tubulin (Btub) gene, partial cds blastn 28056 294 1 Eukaryota Sar   Cercozoa   Glissomonadida   Proleptomonas Proleptomonas faecicola
8020580 8020580 PRJNA222400_P_NODE_2107_length_344_cov_2.491525_g2074_i0 PRJNA222400 2107 344 2.491525 8.570846 Proleptomonas faecicola 149084 SAR_Eukaryotes SAR_Eukaryotes 243 1.8e-59   NTclustered gi|300676734|gb|GQ377664.1| 149084 g2074 i0 80.564 47.9796511627907 319 58 92 4 1 317 56 372 Proleptomonas faecicola alpha-tubulin (Atub) gene, partial cds blastn 16505 243 1 Eukaryota Sar   Cercozoa   Glissomonadida   Proleptomonas Proleptomonas faecicola
31053724 31053724 PRJNA222400_P_NODE_1215_length_468_cov_2.832936_g1182_i0 PRJNA222400 1215 468 2.832936 13.25814048 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 106 7.29e-25   NR MES1913935.1 1215613 g1182 i0 57.8 0.698717948717949 109 45 69.9 1 468 142 106 213 MES1913935.1 hypothetical protein [Cercozoa sp. M6MM] diamond 327 106 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31703631 31703631 PRJNA222400_P_NODE_7097_length_169_cov_1.300000_g7064_i0 PRJNA222400 7097 169 1.3 2.197 root 1 Root_unresolved Root_unresolved 73.2 2.49e-13   NR MES1916036.1 1215613 g7064 i0 64.3 14.9112426035503 56 20 99.4 0 169 2 27 82 MES1916036.1 hypothetical protein [Cercozoa sp. M6MM] diamond 2520 73.2 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;