RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where bioproject = "PRJNA222400", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 14 ✖

tax_clade 1

  • Sar · 14 ✖

bioproject 1

  • PRJNA222400 · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1642002 1642002 PRJNA222400_P_NODE_5262_length_195_cov_1.068493_g5229_i0 PRJNA222400 5262 195 1.068493 2.08356135 Plasmodium fragile 5857 SAR_Eukaryotes SAR_Eukaryotes 69.4 1.67e-7   NTclustered gi|817737722|ref|XM_012478394.1| 5857 g5229 i0 84 15.2769230769231 75 8 37 3 95 166 14437 14510 Plasmodium fragile uncharacterized protein (AK88_00750), partial mRNA blastn 2979 69.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium fragile
2917864 2917864 PRJNA222400_P_NODE_8103_length_166_cov_0.888889_g8070_i0 PRJNA222400 8103 166 0.888889 1.47555574 Cryptosporidium ryanae 515981 SAR_Eukaryotes SAR_Eukaryotes 110 8.13e-20   NTclustered gi|2787718610|ref|XM_067340940.1| 515981 g8070 i0 86.139 5.32530120481928 101 14 61 0 18 118 329 429 Cryptosporidium ryanae 40S ribosomal protein S16 (FG386_001547), partial mRNA blastn 884 110 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae
6744838 6744838 PRJNA222400_P_NODE_3526_length_241_cov_2.536458_g3493_i0 PRJNA222400 3526 241 2.536458 6.11286378 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 75.5 1.03e-14   NR XP_011128579.1 110365 g3493 i0 52.6 0.970954356846473 78 37 97.1 0 237 4 3 80 XP_011128579.1 40S ribosomal protein S9 [Gregarina niphandrodes] diamond 234 75.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
7434432 7434432 PRJNA222400_P_NODE_6166_length_181_cov_0.856061_g6133_i0 PRJNA222400 6166 181 0.856061 1.54947041 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|117575160|emb|AM055942.3| 383379 g6133 i0 100 1.09944751381215 29 0 16 0 15 43 960464 960492 Toxoplasma gondii RH, genomic DNA chromosome Ia blastn 199 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
18218821 18218821 PRJNA222400_P_NODE_1355_length_445_cov_1.270202_g1322_i0 PRJNA222400 1355 445 1.270202 5.6523989 Aconoidasida 422676 SAR_Eukaryotes SAR_Eukaryotes 196 4.5e-61   NR KAF8822852.1 476202 g1322 i0 66.7 3.6 132 44 89 0 424 29 42 173 KAF8822852.1 ribosomal protein RPL11 [Cardiosporidium cionae] diamond 1602 197 0.99492385786802 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
18218883 18218883 PRJNA222400_P_NODE_5675_length_188_cov_1.697842_g5642_i0 PRJNA222400 5675 188 1.697842 3.19194296 Cryptosporidium ubiquitum 857276 SAR_Eukaryotes SAR_Eukaryotes 58.4 3.46e-4   NTclustered gi|1624732328|ref|XM_029018922.1| 857276 g5642 i0 97.059 17.0585106382979 34 1 18 0 2 35 943 910 Cryptosporidium ubiquitum membrane associated thioredoxin (cubi_01910), partial mRNA blastn 3207 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ubiquitum
19493190 19493190 PRJNA222400_P_NODE_5936_length_184_cov_1.540741_g5903_i0 PRJNA222400 5936 184 1.540741 2.83496344 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 67 1.66e-12   NR KAF8822144.1 476202 g5903 i0 61.7 2.93478260869565 60 23 97.8 0 184 5 6 65 KAF8822144.1 ribosomal protein RPS25 [Cardiosporidium cionae] diamond 540 67 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
24593421 24593421 PRJNA222400_P_NODE_2780_length_287_cov_1.302521_g2747_i0 PRJNA222400 2780 287 1.302521 3.73823527 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 141 1.42e-39   NR XP_013333069.1 5804 g2747 i0 72.6 0.878048780487805 84 23 87.8 0 263 12 157 240 XP_013333069.1 lactoylglutathione lyase, putative [Eimeria maxima] diamond 252 141 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
27217922 27217922 PRJNA222400_P_NODE_3322_length_253_cov_1.220588_g3289_i0 PRJNA222400 3322 253 1.220588 3.08808764 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 114 1.5400000000000002e-27   NR KAK1444442.1 33632 g3289 i0 63.9 18.8893280632411 83 30 98.4 0 4 252 424 506 KAK1444442.1 hypothetical protein BgAZ_103480 [Babesia gibsoni] diamond 4779 114 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia gibsoni
27863577 27863577 PRJNA222400_P_NODE_6445_length_177_cov_0.875000_g6412_i0 PRJNA222400 6445 177 0.875 1.54875 Plasmodium cynomolgi strain B 1120755 SAR_Eukaryotes SAR_Eukaryotes 62 2.39e-9   NR XP_004225382.1 1120755 g6412 i0 52.7 2.83050847457627 55 26 93.2 0 5 169 91 145 XP_004225382.1 asparagine - tRNA ligase [Plasmodium cynomolgi strain B] diamond 501 62 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium cynomolgi
28891594 28891594 PRJNA222400_P_NODE_2648_length_296_cov_1.834008_g2615_i0 PRJNA222400 2648 296 1.834008 5.42866368 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 108 3.39e-28   NR CAL7860326.1 1344799 g2615 i0 57.3 1.81418918918919 89 37 89.2 1 295 32 32 120 CAL7860326.1 unnamed protein product [Sarcocystis calchasi] diamond 537 108 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
31323995 31323995 PRJNA222400_P_NODE_6095_length_182_cov_1.172932_g6062_i0 PRJNA222400 6095 182 1.172932 2.13473624 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 107 8.350000000000001e-27   NR XP_013335841.1 5804 g6062 i0 76.7 21.7417582417582 60 14 98.9 0 181 2 60 119 XP_013335841.1 nucleoside diphosphate kinase, putative [Eimeria maxima] diamond 3957 108 0.990740740740741 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
31591160 31591160 PRJNA222400_P_NODE_3896_length_226_cov_1.468927_g3863_i0 PRJNA222400 3896 226 1.468927 3.31977502 Cryptosporidium hominis 237895 SAR_Eukaryotes SAR_Eukaryotes 64.7 5.53e-10   NR KAL3126795.1 237895 g3863 i0 37.5 5.03097345132743 80 43 96.9 2 222 4 419 498 KAL3126795.1 putative sortilin [Cryptosporidium hominis] diamond 1137 64.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
32209869 32209869 PRJNA222400_P_NODE_3878_length_227_cov_1.140449_g3845_i0 PRJNA222400 3878 227 1.140449 2.58881923 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 99.4 1.35e-24   NR OEH75439.1 88456 g3845 i0 54.7 5.90748898678414 75 34 99.1 0 2 226 22 96 OEH75439.1 ubiquitin-conjugating related protein [Cyclospora cayetanensis] diamond 1341 100 0.994 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;