RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA222400", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA222400 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26789273 26789273 PRJNA222400_P_NODE_4901_length_201_cov_1.447368_g4868_i0 PRJNA222400 4901 201 1.447368 2.90920968 Fidelibacterota bacterium 2026760 Bacteria Bacteria 66.6 2.47e-11   NR NQT61640.1 2026760 g4868 i0 63.3 7.3134328358209 49 18 73.1 0 198 52 121 169 NQT61640.1 oxidoreductase [Fidelibacterota bacterium] diamond 1470 66.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28084586 28084586 PRJNA222400_P_NODE_8085_length_166_cov_0.888889_g8052_i0 PRJNA222400 8085 166 0.888889 1.47555574 Fidelibacterota bacterium 46_43 1635280 Bacteria Bacteria 51.2 7.75e-6   NR KUK92035.1 1635280 g8052 i0 52.7 0.993975903614458 55 26 99.4 0 166 2 64 118 KUK92035.1 MAG: Uncharacterized protein XE04_0695 [Fidelibacterota bacterium 46_43] diamond 165 51.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium 46_43
32666110 32666110 PRJNA222400_P_NODE_9360_length_162_cov_0.920354_g9327_i0 PRJNA222400 9360 162 0.920354 1.49097348 Fidelibacterota bacterium 2026760 Bacteria Bacteria 63.2 9.22e-11   NR MFQ6674978.1 2026760 g9327 i0 48.1 4.94444444444444 54 28 100 0 162 1 73 126 MFQ6674978.1 nucleoside-diphosphate kinase [Fidelibacterota bacterium] diamond 801 63.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;