RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA222400", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA222400 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10571260 10571260 PRJNA222400_P_NODE_3969_length_224_cov_1.485714_g3936_i0 PRJNA222400 3969 224 1.485714 3.32799936 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 128 4.46e-35   NR MCX6574018.1 2052149 g3936 i0 78.4 28.7410714285714 74 16 99.1 0 222 1 145 218 MCX6574018.1 formate--tetrahydrofolate ligase [Candidatus Aminicenantes bacterium] diamond 6438 128 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
28779187 28779187 PRJNA222400_P_NODE_547_length_692_cov_1.612753_g517_i0 PRJNA222400 547 692 1.612753 11.16025076 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 53.1 1.16e-4   NR MBN2199813.1 2052149 g517 i0 33.3 0.338150289017341 78 52 33.8 0 356 123 74 151 MBN2199813.1 PH domain-containing protein [Candidatus Aminicenantes bacterium] diamond 234 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;