RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA217180", tax_phylum = "Nanobdellota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA217180 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6744716 6744716 PRJNA217180_P_NODE_12586_length_167_cov_0.864407_g12486_i0 PRJNA217180 12586 167 0.864407 1.44355969 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 59.3 1.35e-9   NR MDD5648930.1 2910166 g12486 i0 48.1 0.970059880239521 54 28 97 0 162 1 35 88 MDD5648930.1 hypothetical protein [Candidatus Nanoarchaeia archaeon] diamond 162 59.3 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
29379232 29379232 PRJNA217180_P_NODE_13429_length_165_cov_0.879310_g13329_i0 PRJNA217180 13429 165 0.87931 1.4508615 Nanobdellota archaeon 2026764 Archaea Archaea 64.7 2.37e-10   NR MEK6828598.1 2026764 g13329 i0 65.2 0.836363636363636 46 14 80 1 7 138 347 392 MEK6828598.1 isoleucine--tRNA ligase [Nanoarchaeota archaeon] diamond 138 64.7 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32065429 32065429 PRJNA217180_P_NODE_15398_length_161_cov_0.910714_g15298_i0 PRJNA217180 15398 161 0.910714 1.46624954 Nanobdellota archaeon 2026764 Archaea Archaea 73.9 2.88e-14   NR MCK4521863.1 2026764 g15298 i0 66.7 0.950310559006211 51 17 95 0 153 1 134 184 MCK4521863.1 phage portal protein [Nanoarchaeota archaeon] diamond 153 73.9 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;