RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

20 rows where bioproject = "PRJNA217180" and tax_phylum = "Minisyncoccota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 20 ✖

tax_clade 1

bioproject 1

  • PRJNA217180 · 20 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26852722 26852722 PRJNA217180_P_NODE_11761_length_172_cov_1.292683_g11661_i0 PRJNA217180 11761 172 1.292683 2.22341476 Minisyncoccota bacterium 2053589 Bacteria Bacteria 72.4 2.59e-14   NR MDD5068076.1 2053589 g11661 i0 64.3 0.976744186046512 56 20 97.7 0 171 4 41 96 MDD5068076.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 168 72.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27073950 27073950 PRJNA217180_P_NODE_9662_length_189_cov_1.285714_g9562_i0 PRJNA217180 9662 189 1.285714 2.42999946 Minisyncoccota bacterium 2053589 Bacteria Bacteria 103 9.84e-25   NR MCF7865573.1 2053589 g9562 i0 77.4 0.984126984126984 62 14 98.4 0 2 187 155 216 MCF7865573.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 186 103 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27295244 27295244 PRJNA217180_P_NODE_12603_length_167_cov_0.864407_g12503_i0 PRJNA217180 12603 167 0.864407 1.44355969 Minisyncoccota bacterium 2053589 Bacteria Bacteria 84.3 2.89e-17   NR MBP6869126.1 2053589 g12503 i0 83 3.68263473053892 53 5 95.2 1 3 161 324 372 MBP6869126.1 translational GTPase TypA [Candidatus Paceibacterota bacterium] diamond 615 84.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27453385 27453385 PRJNA217180_P_NODE_12503_length_167_cov_0.864407_g12403_i0 PRJNA217180 12503 167 0.864407 1.44355969 Minisyncoccota bacterium 2053589 Bacteria Bacteria 86.7 4.98e-19   NR MEO5646333.1 2053589 g12403 i0 80 1.97604790419162 55 11 98.8 0 165 1 28 82 MEO5646333.1 helix-turn-helix domain-containing protein [Candidatus Paceibacterota bacterium] diamond 330 86.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27642844 27642844 PRJNA217180_P_NODE_15384_length_161_cov_0.910714_g15284_i0 PRJNA217180 15384 161 0.910714 1.46624954 Minisyncoccota bacterium 2053589 Bacteria Bacteria 48.1 9.5e-5   NR HEY6020918.1 2053589 g15284 i0 49 0.91304347826087 49 25 91.3 0 161 15 6 54 HEY6020918.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 147 48.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28558442 28558442 PRJNA217180_P_NODE_14607_length_163_cov_0.894737_g14507_i0 PRJNA217180 14607 163 0.894737 1.45842131 Minisyncoccota bacterium 2053589 Bacteria Bacteria 76.6 1.42e-14   NR HVY36120.1 2053589 g14507 i0 72.2 0.993865030674847 54 15 99.4 0 163 2 163 216 HVY36120.1 phenylalanine--tRNA ligase subunit beta [Candidatus Paceibacterota bacterium] diamond 162 76.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28702480 28702480 PRJNA217180_P_NODE_10027_length_186_cov_1.489051_g9927_i0 PRJNA217180 10027 186 1.489051 2.76963486 Pseudomonadati 3379134 Bacteria Bacteria 73.6 2.3e-13   NR MEX1028154.1 2053589 g9927 i0 54.1 4.91935483870968 61 28 98.4 0 185 3 362 422 MEX1028154.1 DNA methyltransferase [Candidatus Paceibacterota bacterium] diamond 915 73.9 0.995940460081191 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29126880 29126880 PRJNA217180_P_NODE_13049_length_166_cov_0.871795_g12949_i0 PRJNA217180 13049 166 0.871795 1.4471797 Minisyncoccota bacterium 2053589 Bacteria Bacteria 69.7 4.08e-12   NR MFA5987441.1 2053589 g12949 i0 54.5 1.96987951807229 55 25 99.4 0 2 166 693 747 MFA5987441.1 AAA family ATPase [Candidatus Paceibacterota bacterium] diamond 327 69.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29284291 29284291 PRJNA217180_P_NODE_15009_length_162_cov_0.902655_g14909_i0 PRJNA217180 15009 162 0.902655 1.4623011 Minisyncoccota bacterium 2053589 Bacteria Bacteria 99 8.680000000000001e-26   NR HOV89030.1 2053589 g14909 i0 85.2 1 54 8 100 0 1 162 4 57 HOV89030.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 162 99 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29442095 29442095 PRJNA217180_P_NODE_15370_length_161_cov_0.910714_g15270_i0 PRJNA217180 15370 161 0.910714 1.46624954 Minisyncoccota bacterium 2053589 Bacteria Bacteria 44.3 0.00351   NR MCF7864982.1 2053589 g15270 i0 76.9 0.484472049689441 26 6 48.4 0 159 82 252 277 MCF7864982.1 aromatic amino acid ammonia-lyase [Candidatus Paceibacterota bacterium] diamond 78 44.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29726251 29726251 PRJNA217180_P_NODE_14510_length_163_cov_0.894737_g14410_i0 PRJNA217180 14510 163 0.894737 1.45842131 Minisyncoccota bacterium 2053589 Bacteria Bacteria 94.7 5.9e-21   NR MCU0678158.1 2053589 g14410 i0 92.5 0.975460122699387 53 4 97.5 0 3 161 255 307 MCU0678158.1 efflux RND transporter permease subunit [Candidatus Paceibacterota bacterium] diamond 159 94.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29979185 29979185 PRJNA217180_P_NODE_11411_length_175_cov_1.214286_g11311_i0 PRJNA217180 11411 175 1.214286 2.1250005 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.1 2.99e-7   NR MFA6049656.1 2053589 g11311 i0 60.6 0.565714285714286 33 13 56.6 0 2 100 146 178 MFA6049656.1 ribonuclease H-like YkuK family protein [Candidatus Paceibacterota bacterium] diamond 99 55.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30200140 30200140 PRJNA217180_P_NODE_15012_length_162_cov_0.902655_g14912_i0 PRJNA217180 15012 162 0.902655 1.4623011 Minisyncoccota bacterium 2053589 Bacteria Bacteria 48.1 1.52e-4   NR HEY6021369.1 2053589 g14912 i0 51.2 0.796296296296296 43 21 79.6 0 27 155 14 56 HEY6021369.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 129 48.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31085050 31085050 PRJNA217180_P_NODE_15435_length_161_cov_0.910714_g15335_i0 PRJNA217180 15435 161 0.910714 1.46624954 Minisyncoccota bacterium 2053589 Bacteria Bacteria 51.2 1.24e-5   NR MFA6609189.1 2053589 g15335 i0 50 0.782608695652174 42 21 78.3 0 156 31 499 540 MFA6609189.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 126 51.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31496283 31496283 PRJNA217180_P_NODE_15456_length_161_cov_0.910714_g15356_i0 PRJNA217180 15456 161 0.910714 1.46624954 Minisyncoccota bacterium 2053589 Bacteria Bacteria 83.2 6.71e-17   NR MEZ4104134.1 2053589 g15356 i0 73.6 0.987577639751553 53 14 98.8 0 1 159 452 504 MEZ4104134.1 CTP synthase [Candidatus Paceibacterota bacterium] diamond 159 83.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31938775 31938775 PRJNA217180_P_NODE_14357_length_163_cov_0.894737_g14257_i0 PRJNA217180 14357 163 0.894737 1.45842131 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.2 1.06e-7   NR MFA6050501.1 2053589 g14257 i0 89.7 2.13496932515337 29 3 53.4 0 163 77 172 200 MFA6050501.1 toprim domain-containing protein [Candidatus Paceibacterota bacterium] diamond 348 56.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32223780 32223780 PRJNA217180_P_NODE_10238_length_185_cov_1.007353_g10138_i0 PRJNA217180 10238 185 1.007353 1.86360305 Minisyncoccota bacterium 2053589 Bacteria Bacteria 108 2.89e-27   NR MCF7865031.1 2053589 g10138 i0 85.2 2.96756756756757 61 9 98.9 0 3 185 37 97 MCF7865031.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 549 108 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32603214 32603214 PRJNA217180_P_NODE_13480_length_165_cov_0.879310_g13380_i0 PRJNA217180 13480 165 0.87931 1.4508615 Minisyncoccota bacterium 2053589 Bacteria Bacteria 94.7 1.29e-21   NR MFA5387279.1 2053589 g13380 i0 85.5 1.96363636363636 55 8 100 0 165 1 131 185 MFA5387279.1 major capsid protein [Candidatus Paceibacterota bacterium] diamond 324 94.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32760602 32760602 PRJNA217180_P_NODE_14400_length_163_cov_0.894737_g14300_i0 PRJNA217180 14400 163 0.894737 1.45842131 Minisyncoccota bacterium 2053589 Bacteria Bacteria 65.9 8.49e-11   NR MFA6049671.1 2053589 g14300 i0 52.8 0.975460122699387 53 25 97.5 0 161 3 40 92 MFA6049671.1 bifunctional DNA primase/polymerase [Candidatus Paceibacterota bacterium] diamond 159 65.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32791901 32791901 PRJNA217180_P_NODE_13800_length_164_cov_0.886957_g13700_i0 PRJNA217180 13800 164 0.886957 1.45460948 Minisyncoccia bacterium 3120121 Bacteria Bacteria 46.6 3.68e-4   NR MFN3692627.1 3120121 g13700 i0 51 0.896341463414634 49 23 89.6 1 163 17 139 186 MFN3692627.1 hypothetical protein [Minisyncoccia bacterium] diamond 147 46.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia       Minisyncoccia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;