RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA217180" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA217180 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27091794 27091794 PRJNA217180_P_NODE_6382_length_232_cov_1.672131_g6282_i0 PRJNA217180 6382 232 1.672131 3.87934392 root 1 Root_unresolved Root_unresolved 44.7 0.00685   NR PFX21664.1 50429 g6282 i0 42.2 1.06034482758621 45 26 58.2 0 77 211 230 274 PFX21664.1 hypothetical protein AWC38_SpisGene13848 [Stylophora pistillata] diamond 246 44.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
31766824 31766824 PRJNA217180_P_NODE_15117_length_161_cov_3.812500_g15017_i0 PRJNA217180 15117 161 3.8125 6.138125 root 1 Root_unresolved Root_unresolved 54.3 9.88e-7   NR XP_065669175.1 6087 g15017 i0 95.8 117.614906832298 24 1 44.7 0 160 89 331 354 XP_065669175.1 guanine nucleotide-binding protein G(i) subunit alpha isoform X2 [Hydra vulgaris] diamond 18936 54.7 0.992687385740402 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;