RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA217180" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA217180 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30990392 30990392 PRJNA217180_P_NODE_14434_length_163_cov_0.894737_g14334_i0 PRJNA217180 14434 163 0.894737 1.45842131 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 92.8 2.86e-20   NR MBK7841898.1 2711154 g14334 i0 75.9 0.993865030674847 54 13 99.4 0 162 1 191 244 MBK7841898.1 hypothetical protein [Candidatus Obscuribacter sp.] diamond 162 92.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
32445409 32445409 PRJNA217180_P_NODE_13319_length_165_cov_0.879310_g13219_i0 PRJNA217180 13319 165 0.87931 1.4508615 Candidatus Melainabacteria bacterium RIFOXYA2_FULL_32_9 1801611 Bacteria Bacteria 58.2 2.13e-8   NR OGI18953.1 1801611 g13219 i0 54.7 0.963636363636364 53 24 96.4 0 3 161 46 98 OGI18953.1 MAG: hypothetical protein A2255_00090 [Candidatus Melainabacteria bacterium RIFOXYA2_FULL_32_9] diamond 159 58.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium RIFOXYA2_FULL_32_9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;